Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000252g0001 ATGGTGCACGACGCGGCGCGCGACCTCCGCGTCCAGGAGGCCCGCGTGGACGAGGCAGTGCAGCGGCGCGTGCAGGTGGTGGCGGCACTGCTGCAGGAGCTCGAAAGCCAGCTCGCACTGCTAGACATGGCCCTCAAGGTGGCGCAGACCCGGCTGCAGTCGAGGATGGAGCGAAAGAGGATTGAAAACACTAGGGACTTGCCTCAATACGGACTGGTCGACGAGGTCAAGTCCATCTCAGAGCAATGCAGTGCTATACTAGGCCAGTTGAAACAAGCTGAAATCGCCTTGCAGAGTCTAACGGATACTCGAAACCATTTGGAAAAGGCTATCGTCCAGAAGCGCAAGAGTTTGCACGCAGACCGCGATCGTGTCCAAGTGGCAACGAAGAAGGAGGCGCCCAAAAAGGCCGCCACCGGTGCGAAAGCCACCGGTGCCACGGCTAAAGCCCCCGCAGCTGCCAAGAAAGCGGGAGACGCTAAGAAGCCAGCAGCTGCACCTGCCAAGGCCCCAGCCAAGGCTCCAGCAGCAGCGAAGCCTGCTGCGAAGGCAGCTGAGCCCAAGAAGGCTGCTGCCGCTCCAGCTAAGCCTGCCACCGCTGCTCCAGCAAAGGCTGCTGCTCCTGCCAAGCCTGCGGGATCTACCTCTGCTGTGAAGAAGGCCGCAGCTGCTGCTCCCAAAAAGGCAGCCCCCAAGAAAGTTGCTGGTGGCGTTAAGAAGCCAGTTCCAAAGAAGATGGTTCTTAAAGGCAAAGGTCAGAAGAAGAAGAAGGTTTCTCTCAAGTTCCTTCTCGACTGCACGAATCCTGTTGAAGATAACATCATGGATGTTGCCAACTTCGAAAAGTATCTGCAAGAAAGAATTAAGGTGAATGGTAAAATTAACAACTTTGGCAATGCAGTGTCCCTGGAGAGGCAAAAGATGAAGATTTGTGTGAGCTCTGAGGTTCCCTTCTCAAAAAGGTACCTTAAATATCTTACGAAGAGGTACTTGAAGAAGAATAACTTGAGGGATTGGTTGCGAGTGGTTGCCACATCAAAGGACACCTATGAACTCAGATACTTCCAGATCAACAGCCAGGAAGATGATGATGATGAAGATAACGATTAA 1110 0.5378 MVHDAARDLRVQEARVDEAVQRRVQVVAALLQELESQLALLDMALKVAQTRLQSRMERKRIENTRDLPQYGLVDEVKSISEQCSAILGQLKQAEIALQSLTDTRNHLEKAIVQKRKSLHADRDRVQVATKKEAPKKAATGAKATGATAKAPAAAKKAGDAKKPAAAPAKAPAKAPAAAKPAAKAAEPKKAAAAPAKPATAAPAKAAAPAKPAGSTSAVKKAAAAAPKKAAPKKVAGGVKKPVPKKMVLKGKGQKKKKVSLKFLLDCTNPVEDNIMDVANFEKYLQERIKVNGKINNFGNAVSLERQKMKICVSSEVPFSKRYLKYLTKRYLKKNNLRDWLRVVATSKDTYELRYFQINSQEDDDDEDND 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000252g0001 369 Gene3D - 249 368 IPR038526 -
Alju1000252g0001 369 PANTHER 60S RIBOSOMAL PROTEIN L22 174 365 IPR002671 GO:0003735|GO:0005840|GO:0006412
Alju1000252g0001 369 Coils Coil 31 51 - -
Alju1000252g0001 369 FunFam 60S ribosomal protein L22 1 248 369 - -
Alju1000252g0001 369 Pfam Tektin family 34 126 - -
Alju1000252g0001 369 Coils Coil 90 110 - -
Alju1000252g0001 369 MobiDBLite consensus disorder prediction 114 137 - -
Alju1000252g0001 369 MobiDBLite consensus disorder prediction 114 212 - -
Alju1000252g0001 369 Pfam Ribosomal L22e protein family 258 364 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000252g0001 254 364 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 56.522 3.93e-30 110