Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000199g0004 ATGGCCGCGGCAGCTGAGGCGGCTCAAGGATCTTTCAGGCAAGGGTGCAACGACTCCACTTCACAATTAAAACCTGCGCAAGGGGCACTGAGAGGACAGAATATTAAAATCTTGACGTATCGTGTCAGAGGGTTGACCAGTCAGATTCTATTAGAACGCTGGCTTCTTTTCGATGTTAGTGTCGTACACCTACATTCGTGCGTTCTAACCGAAGCTAGAGAGAAACTCGTATCTCTGAAGTCTCAAGCTGAAGAGTCCATTTTACAACGACAATTGGGTGCTCATCCCCTCATTGTACTTAAAGACATGCAATTTTCAGTTTTGAAGTCTCTCATTGAATTCATGTACTGTGGGGAGACCAGTGTAACTGAGGACAATCTAGGAGCACTTCTTCAAGCTGCCAAATTTTTCAGGAGATTTTGCCAAAAAAGTTCAGGTGCGAACTACTGCTTCTGGAAAAAGATAGGCATGCAGACAACTCTGGTCTCAACTGCTGACGCAATGAACAAAAAGATTATTGGCTCCAACACTACCACTACAACAACTGCTGGCTCATCTATGTCTCAGACACGAGTGGGCTCTGCTGGCGACTCCTCTGCAATCAAGGTCTCAACAGCTCAAGGTGTGTCAACAATCTCTACTGATACTGCTCAGTTACTTCTCAACCTATCTGGTGCTGAAAGTACCTTACCTCAAGCAGCTAGTTCTGTTGAGTCACCACCAGTTCAAGTTATGACCTCAAGGGTAACAACAGCTACAACGTCCACTCCAGAAAAAGTCATGTCAGATGCTGAGATTGCCTTGCAAAAAGAAGCTGATGCTAGTCGCCTTGCCCTGGAAGCCTTGAAGAGAGAAATGAACACAGGAGATCCAGGAAATGTTGCAGCAGTAAAAGCAGAGTTAGTAGAGGCTCAGACAAGATCTCAAGAAAGTGCTGAAGAAGACTTAGCTACCAAAAATGATGATGATATTTCACAAATGCTCGTTACCTCAGACGAAAGTGGCCAGCATGCTGAGGCAGGCACAGCTGAAGTTGTGTACCAAGTAAGTTGTAGTAGATGTCAAGTAAATCTCCTATTTGAAGGTGTATGCATACTGAGCGGACTTTTTGACCAGGTTACAGCTGATGGACATGTTGTTGCCACTACTCCCGTCGGCAATGATCCCAATGCAGCAGGAAATGTTGCTTCATACATGGAAGCATTGAAGGAAGCAGGCTTACCCACTGACCTTCCAATATTACTTGATTCTGGAGATGGCTCATACGTAACTGTGAATGAAGAAGTTCTTATGAACATTTGCAATGGAGGTGTTATCCATTATCAAGTTGCAGAAGGCAATCTTGTTCAAGGAACAGATGGACAAGTAGTTGTTCAAGAAGGTGAAAATGAAACCGAAAATGCTCAAGAGACACAACCCCAGGAACAGACCAAGGACCAATTAAAGACATCTCAGCAGTCTGTGATTCAGCTAGCTGCTGAAACAAAGCCTGTAAATAAACGCAATAGAGTGGTCACTCCTGCTGGAGGTTGTGGCTATACAACTGCAAGACAAATAGTGAAAGCATCGATGGACAAATACCGGCAAGAACAAGCTGGTGTACGCAAATTTGTGGAAGATGGCACTCATGAGGAACATGAAATGGTTGATGAAGACCAGCAGCAGCTTGTTACCACAACAACTGTTGAGCCAACATTAGTGCAAGCTGGAGGTCAAGTGCAGGCTCTGCTCCAAACTTTTGGGGAAGATGGAGAGAGCCAGCAAGAGATGGTGTACTTGGTCACTGACAATCCTGATGAGGTTCTTGCGAGTGGTACCTTTGGAGATGGGAACAGTTTTGCTGTAGTTTCAGATGGAGGCACTGTTGAAGGAGGTCATACATTTTCTATCACTGACGGAAATATAGTTGTGCAGCAAGGTCAGGAAGAAACTGAAATGTCCGTGGAACAGGCCTTAGAAGCAATGATGGGTGGGTCAGATACATCAAACCAAGACACTCCAAGGAATTCATTATCAAATCAAGCCGCAGCAGTCGATGCAGAAAGTATGCGCCTTGTTCTTGGTGACCCTGATGACAAAACTAGCAATAGCGTCTTGCTTCAAGAAAGCAGTGAAAACAAAAGTGAAGACACCCTTGCCATTTTGACAGACAATGCTAAATTGGAGGACACACTCCTGGATGATTTGAATGATGATGATGATGATGGAACGGCCAGTAAGGACATCCCTCTGGCAGTTGGATTATTGCCACTGAGGACTGCCTTAGAGAAAATTCAAGCCACTCCAGAACATCAACCTCGTAAAACTCGTTCCTCTAGTCTAACAGGAGAGGGAAGTAAAGGTGGCAAAAGGAAGAGTGATTCAGAAGGTGATAGTGTTGAAAAGAAAGCTCGATCTGATGAAGTTGTTGATAGTGATGGCATGGGTGATGAAAGGTTTGATGCTGAGGAAGAAAATTCTTCAAGCTATGATGTTGATACCTCCCTTGGTGTTATTACAGAAGATGGTCTGAAAGATGCACCATGA 2526 0.445 MAAAAEAAQGSFRQGCNDSTSQLKPAQGALRGQNIKILTYRVRGLTSQILLERWLLFDVSVVHLHSCVLTEAREKLVSLKSQAEESILQRQLGAHPLIVLKDMQFSVLKSLIEFMYCGETSVTEDNLGALLQAAKFFRRFCQKSSGANYCFWKKIGMQTTLVSTADAMNKKIIGSNTTTTTTAGSSMSQTRVGSAGDSSAIKVSTAQGVSTISTDTAQLLLNLSGAESTLPQAASSVESPPVQVMTSRVTTATTSTPEKVMSDAEIALQKEADASRLALEALKREMNTGDPGNVAAVKAELVEAQTRSQESAEEDLATKNDDDISQMLVTSDESGQHAEAGTAEVVYQVSCSRCQVNLLFEGVCILSGLFDQVTADGHVVATTPVGNDPNAAGNVASYMEALKEAGLPTDLPILLDSGDGSYVTVNEEVLMNICNGGVIHYQVAEGNLVQGTDGQVVVQEGENETENAQETQPQEQTKDQLKTSQQSVIQLAAETKPVNKRNRVVTPAGGCGYTTARQIVKASMDKYRQEQAGVRKFVEDGTHEEHEMVDEDQQQLVTTTTVEPTLVQAGGQVQALLQTFGEDGESQQEMVYLVTDNPDEVLASGTFGDGNSFAVVSDGGTVEGGHTFSITDGNIVVQQGQEETEMSVEQALEAMMGGSDTSNQDTPRNSLSNQAAAVDAESMRLVLGDPDDKTSNSVLLQESSENKSEDTLAILTDNAKLEDTLLDDLNDDDDDGTASKDIPLAVGLLPLRTALEKIQATPEHQPRKTRSSSLTGEGSKGGKRKSDSEGDSVEKKARSDEVVDSDGMGDERFDAEEENSSSYDVDTSLGVITEDGLKDAP 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000199g0004 841 Coils Coil 69 89 - -
Alju1000199g0004 841 MobiDBLite consensus disorder prediction 307 321 - -
Alju1000199g0004 841 Coils Coil 294 314 - -
Alju1000199g0004 841 MobiDBLite consensus disorder prediction 1 20 - -
Alju1000199g0004 841 MobiDBLite consensus disorder prediction 694 711 - -
Alju1000199g0004 841 MobiDBLite consensus disorder prediction 765 779 - -
Alju1000199g0004 841 MobiDBLite consensus disorder prediction 304 323 - -
Alju1000199g0004 841 MobiDBLite consensus disorder prediction 687 711 - -
Alju1000199g0004 841 SUPERFAMILY POZ domain 56 138 IPR011333 -
Alju1000199g0004 841 MobiDBLite consensus disorder prediction 232 258 - -
Alju1000199g0004 841 MobiDBLite consensus disorder prediction 780 819 - -
Alju1000199g0004 841 Gene3D Potassium Channel Kv1.1; Chain A 54 154 IPR011333 -
Alju1000199g0004 841 Pfam BTB/POZ domain 97 138 IPR000210 GO:0005515
Alju1000199g0004 841 MobiDBLite consensus disorder prediction 757 841 - -
Alju1000199g0004 841 Coils Coil 265 285 - -
Alju1000199g0004 841 ProSiteProfiles BTB domain profile. 51 124 IPR000210 GO:0005515
Alju1000199g0004 841 MobiDBLite consensus disorder prediction 461 484 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Alju1000199g0004 BTB 5.9e-07 CL0033