Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000177g0013 ATGGCCTACCAAGTGAGAAGCGAGAAGAAGAAGAAGAAAGAAGGGATGGATAAGTACGAGCTAGTGAAGGACATAGGATCTGGGAATTTCGGGGTGGCCAAGCTGATGCGAAATAAAGAAACCAAGGAGCTTGTTGCCATGAAGTACATTGAACGAGGTCACAGGATCGATGCCAATGTAGCCAGGGAAATCATAAACCATAGATCTCTTTGCCACCCGAACATAATTCGGTTCAAGGAGGTGTTTTTGACTCCAACACATCTTGTAATAGTCATGGAGTATGCAGCTGGTGGAGAGCTTTTTGATCGCATTTGCACTGCTGGAAGATTCAGTGAAGATGAGGCTAGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGCCATACTTTGCAAATCTGCCATCGAGACTTGAAGCTGGAGAATACCTTATTGGATGGCAGCCCCGCTCCACGTCTGAAAATTTGTGATTTTGGCTATTCTAAGTCATCTCTACTCCATTCTAGGCCAAAATCAACAGTCGGAACTCCAGCCTATATTGCACCAGAGGTTCTTTTACGTAGAGAATATGATGGAAAGTTGGCTGATGTATGGTCTTGTGGAGTAACTCTTTATGTGATGCTGGTGGGAGCATACCCATTTGAGGACCCAGAAGATCCTAAGAACTTCAGAAAAACCATAAATCGGATTATGTCTGTTCAATACAAGTTCCCAGATTACGTACACATATCTCAAGACTGTAAACATCTGCTTTCGCGCATTTTTGTCGAAAATCCAGCAAAGAGAATAAGCATGAAAGAAATCAAGTCCCACCCATGGTTTCTAAAGAACCTGCCAAGGGAATTGACAGAAACAGCCCAAGCTGTCTACTACAAGAAAGAAAACCCAACATTTTCACTTCAGAGTGCAGAAGACATAATGAAAATTGTTGAAGAGGCCAAAACTCCACCCTCAGATTCTAAGTCAGCCGGAGAGTTTGGTTGGGGAGAGGAAGGAGGAGAAGAGGAAGAAGGCATAACAAATGATGAGGCAAATGGTGAGGAGGAAGAGGAAGAGTGCGAAAAGAGAGTCGAGGAGGCACAGGCCAGCCGTGATGTTAATAAGGTTGTGAGTTGTAACTTCAAGTTAAGAACCAGACAAAGTTTGTGA 1152 0.4366 MAYQVRSEKKKKKEGMDKYELVKDIGSGNFGVAKLMRNKETKELVAMKYIERGHRIDANVAREIINHRSLCHPNIIRFKEVFLTPTHLVIVMEYAAGGELFDRICTAGRFSEDEARYFFQQLISGVSYCHTLQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLLRREYDGKLADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTINRIMSVQYKFPDYVHISQDCKHLLSRIFVENPAKRISMKEIKSHPWFLKNLPRELTETAQAVYYKKENPTFSLQSAEDIMKIVEEAKTPPSDSKSAGEFGWGEEGGEEEEGITNDEANGEEEEEECEKRVEEAQASRDVNKVVSCNFKLRTRQSL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000177g0013 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Alju1000177g0013 383 Gene3D Transferase(Phosphotransferase) domain 1 95 283 - -
Alju1000177g0013 383 ProSiteProfiles Protein kinase domain profile. 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000177g0013 383 FunFam Serine/threonine-protein kinase SRK2E 16 94 - -
Alju1000177g0013 383 PANTHER SERINE/THREONINE KINASE 17 332 - -
Alju1000177g0013 383 SUPERFAMILY Protein kinase-like (PK-like) 11 304 IPR011009 -
Alju1000177g0013 383 CDD STKc_SnRK2 18 274 - -
Alju1000177g0013 383 Coils Coil 342 364 - -
Alju1000177g0013 383 MobiDBLite consensus disorder prediction 315 363 - -
Alju1000177g0013 383 SMART serkin_6 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000177g0013 383 MobiDBLite consensus disorder prediction 330 356 - -
Alju1000177g0013 383 FunFam Serine/threonine-protein kinase SRK2E 95 283 - -
Alju1000177g0013 383 Pfam Protein kinase domain 19 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000177g0013 383 Gene3D Phosphorylase Kinase; domain 1 2 94 - -
Alju1000177g0013 383 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000177g0013 6 278 CBL-interacting serine-threonine protein kinases AT2G26980 41.901 5.47e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Alju1000177g0013 Pkinase 8.6e-71 CL0016