Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju1000177g0007 | ATGGAGAGGAATTTCAGTTCTTATAGCCTTCACTGGATCTCCAGCATGAAGAAAAGTGAGGGAAAACGCCATAATGATCATTCAGAGAAGACTGATCATCTTGAAGAAGATGATATGTCACCATCTTTCAATCTCCAGAATGTTTCAAAGCTCATCCTTCCACCACTTGGTGTTTCTAGTTATAACCAGAACCCAGTAGAAACCAAAGGGTGGATCATATCTCCCATGGATACAAGATACCGGCATTGGCAGGGTGTGATGGTGCTTCTGGTGGCTTATTCGGCATGGGTTTACCCCTTTGAAGTTGCTTTCCTGCACAGTTCTCCAAATAAGGAAGTGTTCTTAGTGGACAATGTTGTTGATCTTTTCTTCGCTGTTGACATTGTTCTCACATTCTTCGTAGCTTTCATTGATCGAAGAAGTCAACTATTAGTAAGAGACTCAAAAAAGATTGCTGTGAGGTACTTGTCAAGTTGGTTCGTGATGGATGTGGCATCAACTATTCCATATGAAGCATTAAGTTATGTCATCACAGGCAAACACAAGGTAGGTCTTGTTTGCTACCTTCTGGGCATGCTTAGATTTTGGCGACTCAGAAGAATGAAGCAATTTTTTACCAGGTTAGAGAAAGACATTAGATTCAGCTACTTCTGGGTCAGATGCGCAAGACTTCTCTTCGTAACATTATTTTCAGTTCATTGTGCTGGGTGCCTCTACTATCTACTAGCTGATCGGTACCCTCACCAAGGAAAGACATGGATTGGGGCAGTGATTCCAAATTTCAGAGAGACAAGCCTTTGGATTAGATACATTTCAGCCATGTACTGGTCCATCACCACCATGACCACCGTCGGTTATGGTGACCTCCATGCTGTCAACACTGCTGAAATGATATTCATTATTTTTTACATGCTCTTCAACCTTGGCCTCACTGCTTACTTGATTGGTAATATGACAAATCTTGTTGTTGAAGGAACTCGCCGTACTATGGAGTTTAGAAATAGCATTGAAGCTGCATCAAGTTTTGTGGGGCGAAATCGCTTGCCTGTGAGGCTGAAAGAGCAGATTCTGGCCTATATGTGTTTGAGATTTAAGGCAGAAAGCTTAAACCAATATCAGCTTATTGAACAATTACCCAAGTCCATTTGCACAAGCATCTGCCAGCATTTGTTTTTGCCAACAGTGGAGAAAGTCTATCTTTTCAAACATGTCTCTGGAGAAATTCTCTTATCCTTGGTTGCGAAAATGAAGGCAGAGTATCTACCACCTAGAGAGGATGTTATTATGCAGAATGAAGCACCTGATGATGTTTACATCATAGTTTCAGGAGAAGTAGAGATCATTGATTGTGTAATGGAGAAAGAGAGAATTTTAGGGACTTTATTTGCAGGGGACATGTTTGGAGAAGTTGGAGCACTTTGTTGCAAACCTCAATATTTTACCTATAGAACTAAAACTCTCACACAGCTCTTGAGGCTCAAGACCAATGCTCTAATAGAAGCAATGCAAAGTAAAAAGGAAGACAATATACAAATACTCAAAAATTTCCTGCAGCATTTCAAGAAACTAAAAGATCTAAGTATTAGAGATTTAATGGTTGAGAGTGGAGAAGAAGAGGATCCAAACATGGCTGTGAACTTATTAACTGTGGCCAGTACAGGGAATGCTGCTTTTCTTGAAGAGCTTCTCAAGGCAGGTTTGGATCCTGACGTGGGAGACTCAAAAGGGAAAACCCCATTGCACATAGCTGCATCAAATGGGCATGAAGAGTGTGTAAAAGTCTTGCTTAGGCACGCATGCAACATACACACAAGAGACAACAATGGTAACACTGCCTTATGGGGTGCCATAGCATCAAAGCATCTCTCCATATTCAGAATCCTCTATCAATTTGCTTGCCTCTCTGATCCACAAACAGGAAGTGATCTCCTGTGTACTGCAGCAGAAAGAAATGATCTAACAGTAATGAATGATCTTTTGAAACAAGGACTGAATGTAGACTCGAAAGATCGTCATGGTATGACAGCAACCCAAGTAGCCATGGCAGAGAATCATGTTGAAATGGTTCAGCTGCTTGTCATGAATGGAGCAGATGTTTCTGACATACAAACCCATAATTTTTCTGATTCTGCTTTGAATGAAATGCTGAGAAAGCGCGAGACCGGGCATCAGATCACAGTAGATGAGGCGACACCGGGTGAGCATGTAGTAAAGGGAGATGAAGGTGAGCAGGAGGAGCAGAGTTGGGGAAGATCTAGTAAATCAAGCTTCCCAAGAGTGAGTATATATAAAGGCCACCCTATAAACAGAAAAGAAAAAAATTGCAAGGAACCAGGGAGACTCATAAGGTTTCCTGGTTCACTTGAGGAGCTCAAGAGAATTGCAGGTGAGAAGTTTGGGTTTGAAGCAAAAGATGCAATGGTGACTGATGAAGAAGGAGCAGAAATAGACTCCATTGAAGTGATTAGAGACAATGATAAACTTTTCATTGTTGGGTAG | 2499 | 0.4138 | MERNFSSYSLHWISSMKKSEGKRHNDHSEKTDHLEEDDMSPSFNLQNVSKLILPPLGVSSYNQNPVETKGWIISPMDTRYRHWQGVMVLLVAYSAWVYPFEVAFLHSSPNKEVFLVDNVVDLFFAVDIVLTFFVAFIDRRSQLLVRDSKKIAVRYLSSWFVMDVASTIPYEALSYVITGKHKVGLVCYLLGMLRFWRLRRMKQFFTRLEKDIRFSYFWVRCARLLFVTLFSVHCAGCLYYLLADRYPHQGKTWIGAVIPNFRETSLWIRYISAMYWSITTMTTVGYGDLHAVNTAEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASSFVGRNRLPVRLKEQILAYMCLRFKAESLNQYQLIEQLPKSICTSICQHLFLPTVEKVYLFKHVSGEILLSLVAKMKAEYLPPREDVIMQNEAPDDVYIIVSGEVEIIDCVMEKERILGTLFAGDMFGEVGALCCKPQYFTYRTKTLTQLLRLKTNALIEAMQSKKEDNIQILKNFLQHFKKLKDLSIRDLMVESGEEEDPNMAVNLLTVASTGNAAFLEELLKAGLDPDVGDSKGKTPLHIAASNGHEECVKVLLRHACNIHTRDNNGNTALWGAIASKHLSIFRILYQFACLSDPQTGSDLLCTAAERNDLTVMNDLLKQGLNVDSKDRHGMTATQVAMAENHVEMVQLLVMNGADVSDIQTHNFSDSALNEMLRKRETGHQITVDEATPGEHVVKGDEGEQEEQSWGRSSKSSFPRVSIYKGHPINRKEKNCKEPGRLIRFPGSLEELKRIAGEKFGFEAKDAMVTDEEGAEIDSIEVIRDNDKLFIVG | 832 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju1000177g0007 | 832 | FunFam | Potassium channel KAT3 | 82 | 324 | - | - | |
| Alju1000177g0007 | 832 | Pfam | KHA, dimerisation domain of potassium ion channel | 758 | 830 | IPR021789 | - | |
| Alju1000177g0007 | 832 | SUPERFAMILY | Ankyrin repeat | 508 | 701 | IPR036770 | - | |
| Alju1000177g0007 | 832 | Gene3D | - | 544 | 631 | IPR036770 | - | |
| Alju1000177g0007 | 832 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 400 | 519 | IPR000595 | - | |
| Alju1000177g0007 | 832 | ProSiteProfiles | Ankyrin repeat profile. | 639 | 671 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | MobiDBLite | consensus disorder prediction | 727 | 756 | - | - | |
| Alju1000177g0007 | 832 | SMART | ANK_2a | 672 | 701 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | SMART | ANK_2a | 575 | 604 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | SMART | ANK_2a | 542 | 571 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | SMART | ANK_2a | 493 | 525 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | SMART | ANK_2a | 639 | 668 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | SMART | ANK_2a | 608 | 638 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | PRINTS | EAG/ELK/ERG potassium channel family signature | 296 | 307 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Alju1000177g0007 | 832 | PRINTS | EAG/ELK/ERG potassium channel family signature | 270 | 287 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Alju1000177g0007 | 832 | PRINTS | EAG/ELK/ERG potassium channel family signature | 117 | 127 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Alju1000177g0007 | 832 | PRINTS | EAG/ELK/ERG potassium channel family signature | 128 | 137 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Alju1000177g0007 | 832 | PRINTS | EAG/ELK/ERG potassium channel family signature | 314 | 323 | IPR003938 | GO:0005249|GO:0006813|GO:0016020 | |
| Alju1000177g0007 | 832 | ProSiteProfiles | KHA domain profile. | 759 | 832 | IPR021789 | - | |
| Alju1000177g0007 | 832 | MobiDBLite | consensus disorder prediction | 19 | 38 | - | - | |
| Alju1000177g0007 | 832 | SUPERFAMILY | Voltage-gated potassium channels | 75 | 323 | - | - | |
| Alju1000177g0007 | 832 | ProSiteProfiles | Ankyrin repeat profile. | 672 | 704 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | SMART | cnmp_10 | 400 | 517 | IPR000595 | - | |
| Alju1000177g0007 | 832 | Gene3D | - | 82 | 323 | - | - | |
| Alju1000177g0007 | 832 | ProSiteProfiles | Ankyrin repeat region circular profile. | 575 | 607 | - | - | |
| Alju1000177g0007 | 832 | ProSiteProfiles | Ankyrin repeat region circular profile. | 672 | 700 | - | - | |
| Alju1000177g0007 | 832 | Gene3D | Jelly Rolls | 368 | 541 | IPR014710 | - | |
| Alju1000177g0007 | 832 | Pfam | Ion transport protein | 82 | 329 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
| Alju1000177g0007 | 832 | PANTHER | POTASSIUM CHANNEL AKT1 | 45 | 831 | IPR045319 | GO:0005249|GO:0006813 | |
| Alju1000177g0007 | 832 | Pfam | Cyclic nucleotide-binding domain | 420 | 504 | IPR000595 | - | |
| Alju1000177g0007 | 832 | FunFam | Potassium channel KAT2 | 388 | 524 | - | - | |
| Alju1000177g0007 | 832 | Pfam | Ankyrin repeats (3 copies) | 551 | 629 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | MobiDBLite | consensus disorder prediction | 733 | 748 | - | - | |
| Alju1000177g0007 | 832 | ProSiteProfiles | Ankyrin repeat profile. | 575 | 607 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | Gene3D | - | 632 | 728 | IPR036770 | - | |
| Alju1000177g0007 | 832 | PRINTS | Ankyrin repeat signature | 576 | 591 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | PRINTS | Ankyrin repeat signature | 688 | 702 | IPR002110 | GO:0005515 | |
| Alju1000177g0007 | 832 | SUPERFAMILY | cAMP-binding domain-like | 327 | 518 | IPR018490 | - | |
| Alju1000177g0007 | 832 | CDD | CAP_ED | 400 | 513 | IPR000595 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju1000177g0007 | 19 | 580 | Ion Channels | AT4G22200 | 73.145 | 0.0 | 855 |