Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000177g0004 ATGGATTTTCAAAAGATGAAGCAATTAGTTGAAGATGGATCATCATCATCTTCATCTTTCAAGAAGGTGGTGGATGGTACTTTGAAAGGTCCAAACAAGCCGTTATTTGATTTGAATTTGTTGCCAGAAGATTCAGAAGAAGGTGATGGTCATGAGTTTCACATTGAAATATTTGGAAGTGCTGAAACCCCTCAAATTGATCTGAATCTCACTGATAATGAAGTGGTGGATGCAAATTTAAATTCAAATGGATTGGTTCTTCCTTATCAAATTCCTACTTATGGTGGAGACAACAATGGTGCTTCCATCTTCAACAACACCACAACTTCATCAGCAACAAATATGGTGACATCCTCCTATCATCCTTTTGTCTATAAAAGGAAAGTTTGCCACCATGATGGCACTTCGGCCAGTACCGGCACCGCGAGGAGCTTACGCCCTCGCCAGCCGTCATCACCAAACTGTGACCGACGAATCTGCACAAATTACAAATGCAGAACAAGGAACACTCCCATGTGGCGTAGGGGACCTCTAGGTCCAAAGACTCTCTGCAATGCGTGTGGAATTCAGTATAAGAAGCGAGTGTCAAGCAGAGGAAGCGACCTGGTGTGA 612 0.4297 MDFQKMKQLVEDGSSSSSSFKKVVDGTLKGPNKPLFDLNLLPEDSEEGDGHEFHIEIFGSAETPQIDLNLTDNEVVDANLNSNGLVLPYQIPTYGGDNNGASIFNNTTTSSATNMVTSSYHPFVYKRKVCHHDGTSASTGTARSLRPRQPSSPNCDRRICTNYKCRTRNTPMWRRGPLGPKTLCNACGIQYKKRVSSRGSDLV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000177g0004 203 MobiDBLite consensus disorder prediction 9 23 - -
Alju1000177g0004 203 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 158 199 - -
Alju1000177g0004 203 MobiDBLite consensus disorder prediction 135 154 - -
Alju1000177g0004 203 PANTHER GATA TRANSCRIPTION FACTOR 110 193 - -
Alju1000177g0004 203 ProSiteProfiles GATA-type zinc finger domain profile. 165 198 IPR000679 GO:0006355|GO:0043565
Alju1000177g0004 203 SMART GATA_3 154 202 IPR000679 GO:0006355|GO:0043565
Alju1000177g0004 203 MobiDBLite consensus disorder prediction 1 23 - -
Alju1000177g0004 203 CDD ZnF_GATA 159 202 IPR000679 GO:0006355|GO:0043565
Alju1000177g0004 203 Gene3D - 156 202 IPR013088 GO:0006355|GO:0008270
Alju1000177g0004 203 Pfam GATA zinc finger 164 194 IPR000679 GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000177g0004 160 193 C2C2-Gata Transcription Factor Family AT3G20750 73.529 6.21e-14 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju1000177g0004 GATA 1.5e-14 CL0167