Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000175g0001 ATGAGAAAGAGAAGCACCACTAACAGTGCTGGTCACTCATCAAGAAATGACATCTACATGATGCAAGATGACGATGCCAGCGAAGGTGTATGGAGCGACTTTGACAAAATCGAAAAGGCTGCAGAGGGGAAATCTTCTTTGGATTTTACGAAACATCCATTTCGTAATACTTTTGCTAAGGTCACAGCTAAACTTGCAGTTGTGGCTTCTGCCCTATTTTCAAGAAAAATTGCAGCAAAACTTACAGTAGCCAATGTTCTTGCACTAAAAAAGAAGAACAAAAGGTATTTATTGCAACTGCCCAATTGTCCTGAACAAGCAATGAGTGAAGATGTGGGAACCCTACTCATGAGGTATGTGTTTTTAAGAGAAAAGTCTCAATTCACTTGCAAATCCCTGTTTGTCAATTTGTCAGACAAGCCATTTAACATCAAGCCATTGAAACAATCACAAGTAAGGAAAAGGAAAACCCCAAATGCAACCAGGAAAACCAGAAATATTTCTTGTCAGGAGTGTGGCAAGATCTTCAAGGACACATCAAACCTTAAAAGGCATGTCCTCGTCCACACTGGTGAAAAGCCATTTGCATGCAGTCTTTGTGAGCTAAGGCAGATGCAAAATGTAAAACTTTACACGGCGGTGTTGCCTACCCGCCAGGCGCTCCGCCCAAGGCTATTGGCAGGAGAAGGCTGCAGGGCGGAGTCGGGCTCAGTCGACAGTCTGCCTAGGCCATGGGGCCGAGCGAACAGGCCAGCAGGCCGGAAAAGGCCGCAAGCAGTGAGCAGCCTTGCCACAGGGAGTATCAAAATTGTTGCCTTGCCGCTTTGCATTTCCTGTCAGAGCAGTGCCGCAGCCCAGGGGATATCGCTTCAAAGGGGTAGGCCGGTGCGCCAAAAGGGCCCCACAGTCCAAAAAGCCCAGAGGCCCCAGGCCCAGATGCAAGGACGACACGCACTTTCAGAATCGATTGAAGTGGAACTTCATATGTATGCTCAATATGCAGATACACATACAGGAGAAGTGCAAAAAGTTAAAACTTCTGAAAATTGA 1050 0.4648 MRKRSTTNSAGHSSRNDIYMMQDDDASEGVWSDFDKIEKAAEGKSSLDFTKHPFRNTFAKVTAKLAVVASALFSRKIAAKLTVANVLALKKKNKRYLLQLPNCPEQAMSEDVGTLLMRYVFLREKSQFTCKSLFVNLSDKPFNIKPLKQSQVRKRKTPNATRKTRNISCQECGKIFKDTSNLKRHVLVHTGEKPFACSLCELRQMQNVKLYTAVLPTRQALRPRLLAGEGCRAESGSVDSLPRPWGRANRPAGRKRPQAVSSLATGSIKIVALPLCISCQSSAAAQGISLQRGRPVRQKGPTVQKAQRPQAQMQGRHALSESIEVELHMYAQYADTHTGEVQKVKTSEN 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000175g0001 349 ProSitePatterns Zinc finger C2H2 type domain signature. 169 189 IPR013087 -
Alju1000175g0001 349 Gene3D Classic Zinc Finger 165 201 - -
Alju1000175g0001 349 SUPERFAMILY beta-beta-alpha zinc fingers 167 208 IPR036236 -
Alju1000175g0001 349 ProSiteProfiles Zinc finger C2H2 type domain profile. 167 194 IPR013087 -
Alju1000175g0001 349 PANTHER ZINC FINGER PROTEIN 137 201 - -
Alju1000175g0001 349 FunFam zinc finger E-box-binding homeobox 1 167 195 - -
Alju1000175g0001 349 SMART c2h2final6 167 189 IPR013087 -
Alju1000175g0001 349 MobiDBLite consensus disorder prediction 237 257 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju1000175g0001 None None None