Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000139g0001 ATGGAGAATAATCATGAATATGATGTTTCTCTTGATGCTATGTTGCTGGCAAGTGCCCAGCTTTACCCCGCAGTACTGAATGCCGCCATTGAGCTCAACCTCTTTAAGATCATTGGTGAGGGAAGCCCTAAGGGCGTGTCACCCTCTGAAATCGCTTCAAAGCTTCCAAATCCACATGATGACATGGTTCGCCGCCTCGATCGATTGCTGTTTTTGCTTGCTAGTCATTCTGTTTTGACTTGTTCTTCGTCCAACAAAGTTGATTACGATGGTAGAACTGAGAGGCTTTATACTCTATCTCCTGCTGGTAAATACATGTTCCCCAATGAAGATGGAGTGTCTTATGCTTCAGTCTCAAACTTAAGCCACCATCCAGCTTATATAAAAGTTTTGGGAAACATCAAACACATTATACTGGATGAGGAAGAGGACCTGTTCAGGAAAGTTCATGGGATGTCCATGTTTGAATATATGAAAAGAGATCCAACCTTGGAAACTCTTTTCCATAAGGCAATGTCTGATCTTTCATTCATGCACATGAAGCAGATCCTTGAGAAATACGAAGGATTTGAAGGAATATCAATACTTGTTGATGTTGCTGGTGGCATTGGCCAATGCCTCAAAATGATCGTCTCTAAGTACCCTTTAATTCAAGGCATTAACTTTGATCTGCCACATGTTGTTCAAAGTGCCCCATCCCACCCAGGAATCAAACATGTTGGAGGAAATATGTTCGAAAGTGTCCCAGAAGGTGATGCTATAATGATCAAGGCTACAACTCATAACTGGGCAGATGACAAATGCATACAAGTTCTGAAAAATTGTCACAAGTCCCTCAACAAAGGCGGGAAGCTTATTATTATCGACCTAATAAAGCCTGAAATACCAAACGAGACCGATAGCCATAAATACGCTGCGATTCTTGACAACACCATGTTTCTGCAAGCTGGTGGTAAGGAAAGAACTGAGAAAGAATTGGAAGCACTAGGCAAAGCAGCTGGGTTTTCTGGCTATCATGTTGCTGCTCGTGTCTTATCATCTGCTTTGGGAGTCATTGAGTTTTATAAATAA 1071 0.4174 MENNHEYDVSLDAMLLASAQLYPAVLNAAIELNLFKIIGEGSPKGVSPSEIASKLPNPHDDMVRRLDRLLFLLASHSVLTCSSSNKVDYDGRTERLYTLSPAGKYMFPNEDGVSYASVSNLSHHPAYIKVLGNIKHIILDEEEDLFRKVHGMSMFEYMKRDPTLETLFHKAMSDLSFMHMKQILEKYEGFEGISILVDVAGGIGQCLKMIVSKYPLIQGINFDLPHVVQSAPSHPGIKHVGGNMFESVPEGDAIMIKATTHNWADDKCIQVLKNCHKSLNKGGKLIIIDLIKPEIPNETDSHKYAAILDNTMFLQAGGKERTEKELEALGKAAGFSGYHVAARVLSSALGVIEFYK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000139g0001 356 FunFam Caffeic acid 3-O-methyltransferase 1 106 - -
Alju1000139g0001 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 340 IPR029063 -
Alju1000139g0001 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Alju1000139g0001 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 14 356 IPR016461 GO:0008168
Alju1000139g0001 356 PANTHER O-METHYLTRANSFERASE 13 341 IPR016461 GO:0008168
Alju1000139g0001 356 SUPERFAMILY "Winged helix" DNA-binding domain 7 111 IPR036390 -
Alju1000139g0001 356 Gene3D - 1 106 IPR036388 -
Alju1000139g0001 356 Gene3D Vaccinia Virus protein VP39 107 356 IPR029063 -
Alju1000139g0001 356 Pfam O-methyltransferase domain 135 336 IPR001077 GO:0008171
Alju1000139g0001 356 Pfam Dimerisation domain 25 74 IPR012967 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000139g0001 8 356 Monolignol Biosynthesis Gene Families AT5G54160 49.858 1.07e-106 315