Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000116g0011 ATGCCGTTCCTCAATCCCAAGATGAGCTCGCGGCTCGCCGCCATGTTTTACACGGTAGAGGTGGGGGACACCAAGTTCACTATTCTGAAACGCTATCAGAATCTCAAGCCCATTGGATCTGGTGCTCAGGGTATTGTTTGTTTGAGTTCAATGTACGATTGTGAGGTTTTTAGAGCTCTTCTCAATTTGGCAAATGCTTCACAAGATCTAAGCTATGAGATGACAGAACTCTGGAGCGGAAATAGGTGTAAACTCATGAAGTATAATTTTGCAGCCAACTATGAACCTGAAAGTGTGGTTTGCATTGCTGCAGCACTGAAGAGTGCTGCATATGACACTTTGACCCAACAGAATGTGGCCATCAAGAAGTTAAGTAGGCCTTTTCAAAATGTTACCCATGCCAAGCGTGCATACAGGGAGTTTAAGCTCATGAAGCTTGTAAATCACAAAAATATTATTGGACTTTTGAATGCATTCACTCCTCAAAAGTCATTAGAAGAATTCCAGGATGTTTACCTAGTGATGGAGTTAATGGATGCCAATCTATGTCAAGTTATTCAAATGGATTTGGATCATGAACGGATGTCATACCTTCTGTATCAAATGCTGTGTGGAATAAAACATCTCCACTCAGCAGGAATAATTCACCGGGTCATATTGGGTATGGGTTACAAGGAAAATGTGGATATTTGGTCAGTAGGTTGTATTATGGGGGAAATGATTCGTGGAGGAGTCCTATTTCCAGGGACTGACCATATTGACCAGTGGAATAAAATTATAGAGCAACTGGGCACCCCATCGTCAGAATTCATGAAAAGACTTCAACCTACTGTTCGGAGTTATGTTGAAAATAGACCCAGACATAATGGGTATGCATTTGATCGCCTCTTCCCTGATGTTCTATTTCCGTCCGATTCTAGTGAGCACAACAGGCTAAAAGATCAGTGGAAAGAGCTCATCTACTCGGAGGTTATGGAATACGAGATGCAGCATGGTCAAAACAGTTTGGCTTCACCAGCAGCGAGGTCTACGCCCCAACCGCCAGCCGAAGACGTGGTTGAAGATATGGTGGACGGTCAGAGGGCGGCCAGTCGCCGGTAG 1101 0.4396 MPFLNPKMSSRLAAMFYTVEVGDTKFTILKRYQNLKPIGSGAQGIVCLSSMYDCEVFRALLNLANASQDLSYEMTELWSGNRCKLMKYNFAANYEPESVVCIAAALKSAAYDTLTQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHKNIIGLLNAFTPQKSLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRVILGMGYKENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIEQLGTPSSEFMKRLQPTVRSYVENRPRHNGYAFDRLFPDVLFPSDSSEHNRLKDQWKELIYSEVMEYEMQHGQNSLASPAARSTPQPPAEDVVEDMVDGQRAASRR 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000116g0011 366 FunFam Mitogen-activated protein kinase 93 204 - -
Alju1000116g0011 366 SUPERFAMILY Protein kinase-like (PK-like) 24 320 IPR011009 -
Alju1000116g0011 366 Gene3D Transferase(Phosphotransferase) domain 1 219 299 - -
Alju1000116g0011 366 Gene3D Transferase(Phosphotransferase) domain 1 180 217 - -
Alju1000116g0011 366 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 218 288 - -
Alju1000116g0011 366 PRINTS JNK MAP kinase signature 202 213 IPR008351 GO:0004707|GO:0005524|GO:0006468
Alju1000116g0011 366 PRINTS JNK MAP kinase signature 179 194 IPR008351 GO:0004707|GO:0005524|GO:0006468
Alju1000116g0011 366 PRINTS JNK MAP kinase signature 143 152 IPR008351 GO:0004707|GO:0005524|GO:0006468
Alju1000116g0011 366 MobiDBLite consensus disorder prediction 331 366 - -
Alju1000116g0011 366 Pfam Protein kinase domain 110 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000116g0011 366 ProSiteProfiles Protein kinase domain profile. 32 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju1000116g0011 366 Gene3D Phosphorylase Kinase; domain 1 109 179 - -
Alju1000116g0011 366 Gene3D Phosphorylase Kinase; domain 1 8 73 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000116g0011 103 298 MAP Kinase Gene Family AT2G46070 31.837 6.85e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Alju1000116g0011 Pkinase 8.3e-18 CL0016