Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000057g0004 ATGTCAGCAACTTTAGGCGTTAATTTAAGGGTAACTTGTCATGGATCCCGCGGGGATAGAAAGTACATGGAAGATTTCTTCGTCTTGCATTATGAGTCGTCGGAAGATGAACATAAGCTTGAGTATGCTTTCTTCGGGATATTCGACGGACATGGTGGACCAGGGTACGTATTACGCGGAGACGCGAAGGTTAAGTCAACTGGCCAAAAACATCATCAGGATTTGCCTAGCACTTCTGGGACTACAGCATCAATCGCCTTCATTCGAAGAGGGAAAATCTATATTGGACATGTTGGAGACTCATCTATAGTATTGGGATACCAAAAAGAAGGAGAGAGTGATTGGATTGGAAAAGCTCTTACCAAGGACCACAAACCTGAGGATGCTTATGAAGTGGCCCGCATTGAGAGCTGTGGTGGAAAAGTTGTTTCTAAATCAGACGGTTTGTGGAACATGCTGAATCCTCAAGAGGGTGTTCAATTTGTTCAATCAGCAGAAGAGCACAATGAAAAATATGTTTATTCTTCAGGCCAACCAGCCACTGCTAAGAATCAAATGTGGGTTAATCCATCCAAAAGCTTAGTAGATCGTGCTCTCCGACGATGGGCGACTTTTGGTGCTCGTGCTGACAACACAAGTGCTGTCACTTTGTTGTTGGATCTTCCGGGAGTCACTCGAAGAACTAGTGATAGAGTTTCAGCTTTGCAACCAGCTGTGAACTCGGTGATAAACCCAACCTCCTTTTGCTTCTTCAGGGCGTCCAAGGTCAAGAAAGTTTACATCAGAAGGATGGAAAAAGAATTACTCTCACCATATCCCGCAACTTCTGTCTCTGATCCTCGTGTGGCCATTTTCACACGTCCTTCATCATTGGAACCAGCTCCTGAAGACAATGTTCCAAACTCAACTGTTAATCAAGAGAGCAAAACCTCACAAATCTCTGAGAAGTGTGAAGCTAATTCTCTCAAACCAAATGAGTCTGTTTCTGAAGAGAAGACCCCCGAGTGTCACGAGCATTGCGTTAAGGCGCATGAACATTCTCCTCCTAGCGATGTTGTTGCTGCTGCTGGCCCTGTGAGCAAAGACGTAAATTGTTTTCAGAAAGAGCAAGAGAACTGCTGTATGAAATCCAGTAAAGTCCAGGAATTGCCAAGACTTCAATCCCCTGCACAACAGCTTTCTGAATCACTACAACGTCTTTCCCACAAGAGATTGCGAGGAAAAAATATGATCGGAGGAGAATCAATTAATCCTTGTGCCTTCTCTTTGCTCAGATCTAACTCCTCCGGTTTGATTGGGCAAAATGTTAGCTCCGGCCCATATGTTTCTGTTTACCTTGGTGCTAAAAGAAGGACTCGTTCAGAGGATAAATTACTTCAAGCAGTTGGTCGTTTAGACTTGAGAACCAGTGATGAAGAAAATAAGAGGACTGGCTGGACTGTAAGCTGGATGAACAGATTGCGACCTTCAGATGGGGGTTCTGAAGAGAATAATGCTCACACCTGTTCATCAAGAAGAAAGAAAAAATGGATTAGGTGTCGGAACTCAATGGGGAGAGTTAAGCAAGCCAGGCCCTCGGTTCCAATTCGTTCTAGCACAGCCTATGTAAAGGGTTGTGACATAGCAATCAATAGAGATTGTAACAGTGAACACAATAGCTCGAGAGTTCTGAGGTCTGACACTCACTCGAGTATGCCAGTTCACACTCTTCGCTCTCAAAATGTGGACCTGAAAGTTTCAAGACTAGCGATTCATGTAAGTTATTTCTGTTGTTTCACAGCAGAACCAAAAGTCGTCAACCCATCCGGATCAACTATTCGGGAACGACAGTCTGGGGGTAGTGAGTGGGCATGGGGTGCCATTGGTGCTATGTTCAAATTTTGACTATTGCATCCATTTTTTCTGGTTGAAGTCTTTATTGTCAGTAGCACCAAGGGAGACAGCAGCATTCTGCATTATATCCTTGTCTGTTTCTCAATTTTGAACCTCAGTACAGTGGTTTGTCTTTGGCTCTTTCCAGCTGAAGATGATGACTTCTGTCTTAAAAATATTGTTCTTTCTCCTGTGTTTCTAATGCAAATCTCATCATAG 2091 0.4371 MSATLGVNLRVTCHGSRGDRKYMEDFFVLHYESSEDEHKLEYAFFGIFDGHGGPGYVLRGDAKVKSTGQKHHQDLPSTSGTTASIAFIRRGKIYIGHVGDSSIVLGYQKEGESDWIGKALTKDHKPEDAYEVARIESCGGKVVSKSDGLWNMLNPQEGVQFVQSAEEHNEKYVYSSGQPATAKNQMWVNPSKSLVDRALRRWATFGARADNTSAVTLLLDLPGVTRRTSDRVSALQPAVNSVINPTSFCFFRASKVKKVYIRRMEKELLSPYPATSVSDPRVAIFTRPSSLEPAPEDNVPNSTVNQESKTSQISEKCEANSLKPNESVSEEKTPECHEHCVKAHEHSPPSDVVAAAGPVSKDVNCFQKEQENCCMKSSKVQELPRLQSPAQQLSESLQRLSHKRLRGKNMIGGESINPCAFSLLRSNSSGLIGQNVSSGPYVSVYLGAKRRTRSEDKLLQAVGRLDLRTSDEENKRTGWTVSWMNRLRPSDGGSEENNAHTCSSRRKKKWIRCRNSMGRVKQARPSVPIRSSTAYVKGCDIAINRDCNSEHNSSRVLRSDTHSSMPVHTLRSQNVDLKVSRLAIHVSYFCCFTAEPKVVNPSGSTIRERQSGGSEWAWGAIGAMFKFXLLHPFFLVEVFIVSSTKGDSSILHYILVCFSILNLSTVVCLWLFPAEDDDFCLKNIVLSPVFLMQISS 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000057g0004 696 MobiDBLite consensus disorder prediction 295 317 - -
Alju1000057g0004 696 SUPERFAMILY PP2C-like 6 220 IPR036457 -
Alju1000057g0004 696 Gene3D - 2 144 IPR036457 -
Alju1000057g0004 696 Gene3D - 145 220 IPR036457 -
Alju1000057g0004 696 Pfam Protein phosphatase 2C 63 143 IPR001932 -
Alju1000057g0004 696 PANTHER PROTEIN PHOSPHATASE 17 143 IPR015655 GO:0004722|GO:0006470
Alju1000057g0004 696 ProSitePatterns PPM-type phosphatase domain signature. 44 52 IPR000222 GO:0043169
Alju1000057g0004 696 CDD PP2Cc 17 219 IPR001932 -
Alju1000057g0004 696 SMART PP2C_4 1 217 IPR001932 -
Alju1000057g0004 696 MobiDBLite consensus disorder prediction 287 317 - -
Alju1000057g0004 696 ProSiteProfiles PPM-type phosphatase domain profile. 10 219 IPR001932 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000057g0004 21 155 PP2C-type Phosphatase Gene Family AT2G20050 31.288 2.97e-10 62.0