Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000051g0004 ATGGAAAGCGAGTCTGCAAAGCAGAACTTGAGCGACTCTTCGATTTTGTTTGAACTCTCAGCATCCGATGATCTTGAAGCTTTTCAGAAGAGAAGTGGAAGAGAAGGGCTACGACATCAACACGGCAAGCTTAGGTGTGGGAGAAGAATTGGATCGAAGAAGATAGGGTGCGAGAAGAGAACGACCCTCATGATGGAGTCTTCATTTGGAAGTACTAGAGTATTGAAGTACATAATTGAGACTGGTAGGGTTGATGTGAACAAAACATGTGGTTCTGATATGGCCATGACTCTTCATTGTGCTGTTGTTGGTGCCTCTCACTCTTTACTTGATGTGGTTCAGCTCTTGCTTGATGCTGGAGCCAATGTTGATTACCTTGATGCAAGTGGAAATAAGCTTGTCAATTTAATTGCCTCTGCCTTCAATTCCTTCTCTAAGGAAAGAAGAAAGGCCATAGAGTTGTTGCTAAGAGGTGGGCAAGGAGATCAAATCATCAGTCAGGAGATGGAGCAACATAAACTTGCAATGTCTGCTTTGTCCTTAAAAGAAGGAACTGATAAAAAAGAATATCCTGTTGATGTATCATTGCCTGACATAAACAGTGGCATATATGGAATGGACGAGTTCAAAATGTACAATTTCAAGGTGAAGCCATGTTTAAAGGCTTACTCACATGATTTGATAGAGTGTCCGTTTGCTCATCCTCGGGAGAATGCCAGGAGGAAGGACCCACATAAATACCCTTACAGCTGCATCCCCTACCTTGAGTTTCGTAAGGGCACATGCCAGAAGGGAGATGCTTGTGAGTATGCATATGGTGTTTTTGAGTCTTGGCTCCATCCTGCTTAA 849 0.4299 MESESAKQNLSDSSILFELSASDDLEAFQKRSGREGLRHQHGKLRCGRRIGSKKIGCEKRTTLMMESSFGSTRVLKYIIETGRVDVNKTCGSDMAMTLHCAVVGASHSLLDVVQLLLDAGANVDYLDASGNKLVNLIASAFNSFSKERRKAIELLLRGGQGDQIISQEMEQHKLAMSALSLKEGTDKKEYPVDVSLPDINSGIYGMDEFKMYNFKVKPCLKAYSHDLIECPFAHPRENARRKDPHKYPYSCIPYLEFRKGTCQKGDACEYAYGVFESWLHPA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000051g0004 282 Gene3D - 36 196 IPR036770 -
Alju1000051g0004 282 PANTHER UNKEMPT FAMILY MEMBER 18 282 IPR045234 -
Alju1000051g0004 282 SUPERFAMILY Ankyrin repeat 56 135 IPR036770 -
Alju1000051g0004 282 SMART ANK_2a 58 88 IPR002110 GO:0005515
Alju1000051g0004 282 SMART ANK_2a 93 125 IPR002110 GO:0005515
Alju1000051g0004 282 Pfam Ankyrin repeat 98 127 IPR002110 GO:0005515
Alju1000051g0004 282 ProSiteProfiles Ankyrin repeat profile. 93 128 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000051g0004 2 282 C2H2 Transcription Factor Family AT5G12850 39.748 1.39e-72 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju1000051g0004 Ank 0.023 CL0465