Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju1000051g0002 ATGCAATTGCAACGCATATTAACTTCTCTTGTGGGGGCCTACCGCCTGGGCCTTCCTTACAGAAGCCTGAGACTTTACCAAGTCAAAATGGGGATATTAGCTTTTGCAAGTCCAACAAGACCAAATCTAGGAGGTGGAGGGGAGACTTGTGCAGAAACATGGATCAATATCTTTTTTGGAAAGATTGTTAAGTTGGTAGCAGTCAGAATAAGTGGCATGGTTGAAAGGCTCCAATTGTCTCAACAGATAAGAGAGAACGTGTACTGCCTTTTTCAACAAATACTAAATCAAAGGACATCACTTTTCTTCAATCGCCATATTGATCAAATCATTCTCTGTTGTTTCTATGGAATCGTGAAGGTTCAGCTTCTGGGGGGAAGCTGTTGGTTTATAAACTTTTCTTCAGTTATTTATTACATTGTTCTCATTCGATTCTCTTTGCAGATTTCTCAACTGAACTTAACTTTTAGGGAGATCATTTACAACTATAGGGAGAAACCACAATGCAAACCACAAGTTTTTCGTGGTGTATTTATTGACTAG 543 0.3904 MQLQRILTSLVGAYRLGLPYRSLRLYQVKMGILAFASPTRPNLGGGGETCAETWINIFFGKIVKLVAVRISGMVERLQLSQQIRENVYCLFQQILNQRTSLFFNRHIDQIILCCFYGIVKVQLLGGSCWFINFSSVIYYIVLIRFSLQISQLNLTFREIIYNYREKPQCKPQVFRGVFID 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju1000051g0002 180 Gene3D - 33 180 - -
Alju1000051g0002 180 PANTHER RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED 148 180 IPR028309 GO:0006357|GO:0051726
Alju1000051g0002 180 Pfam Retinoblastoma-associated protein B domain 55 180 IPR002719 GO:0005634|GO:0051726
Alju1000051g0002 180 SUPERFAMILY Cyclin-like 54 180 IPR036915 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju1000051g0002 21 180 Core Cell Cycle Gene Families AT3G12280 61.446 6.45e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR RB Alju1000051g0002 RB_B 3.8e-25 CL0065