Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju09g2486 | ATGCCTCCGACCCTCCGATTCCTCAATTCTCTCGACCGCCCCGCTCCCCCGCCCGAGGCCGTCGCCGTCGAATCCGACTTCGTCGTTATTCTCGCCGCCCTCCTCTGCGCCCTCATATGCGTCGTCGGCCTCATCGCCGTCGCCCGCTGCGCCTGGCTCCGCCGAGGATCCGGCGCCTCCTCCTCCCCCGCCCGGGCTCTGGCCAACAAGGGTCTCAAGAAGAAAGTTCTGCAGTCGCTCCCGAGATTCACCTACGTGAACGGCAGTCCAAATAAGTGGGTAGTGACGTCGGAGTGCGCGATTTGCCTGGGGGAGTTCGCCGACGGCGACGAGATCCGGGTCCTTCCTCAGTGCCGGCACGGCTTTCACATGGCCTGCATCGACACGTGGCTGGGGTCCCACTCTTCGTGCCCCTCTTGTCGGCAGATTCTGGCGGTGGCCAGGTGCCAGAGGTGCGGGCAGTACCCGGCGGGATCGGCCGGAGCCGCCAGCAGCTCCGCCGGTGAACCTGAGCTGAAGTCTAGAGAGGACGGCAATGCCGCTGCTAATAATAACATAAGCAGCGGGTTTAATAATTTCTTGCCTTGA | 588 | 0.6361 | MPPTLRFLNSLDRPAPPPEAVAVESDFVVILAALLCALICVVGLIAVARCAWLRRGSGASSSPARALANKGLKKKVLQSLPRFTYVNGSPNKWVVTSECAICLGEFADGDEIRVLPQCRHGFHMACIDTWLGSHSSCPSCRQILAVARCQRCGQYPAGSAGAASSSAGEPELKSREDGNAAANNNISSGFNNFLP | 195 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju09g2486 | 195 | CDD | RING-H2_EL5-like | 98 | 141 | - | - | |
Alju09g2486 | 195 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 20 | 153 | - | - | |
Alju09g2486 | 195 | MobiDBLite | consensus disorder prediction | 178 | 195 | - | - | |
Alju09g2486 | 195 | FunFam | E3 ubiquitin-protein ligase ATL6 | 60 | 147 | - | - | |
Alju09g2486 | 195 | ProSiteProfiles | Zinc finger RING-type profile. | 99 | 141 | IPR001841 | - | |
Alju09g2486 | 195 | SMART | ring_2 | 99 | 140 | IPR001841 | - | |
Alju09g2486 | 195 | MobiDBLite | consensus disorder prediction | 159 | 195 | - | - | |
Alju09g2486 | 195 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 60 | 146 | IPR013083 | - | |
Alju09g2486 | 195 | Pfam | Ring finger domain | 98 | 141 | IPR001841 | - | |
Alju09g2486 | 195 | SUPERFAMILY | RING/U-box | 79 | 146 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju09g2486 | Alju-ChrAlju09 | 47685635 | 47686222 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju09g2486 | 5 | 152 | C3H Transcription Factor Family | AT1G20823 | 62.500 | 2.74e-60 | 185 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Alju09g2486 | 09 | 47685635 | 47686222 | Alju12g1739 | 12 | 38547142 | 38547798 | CCT | |
Alju09g2486 | 09 | 47685635 | 47686222 | Alju09g2486 | 09 | 47685635 | 47686222 | ECH |