Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2479 ATGGCGGGAGTTTGGTCTGTGGTGCTGATGATTCTCTTCCATATATTCTCTTCGACCGAGGCTGCCTCGAACCATTCCACAAGACCCGATTCTGTAAATATTGGGGTTCTCTACTCTTTCAACACCACCGTTGGTCAAATTGTAAAGACTGCAATAGAAGCTGCAATTGAAGATGTAAATTTTGATCCATCTATTCTTGGTGAAACTAAGCTCAAAGTCTCAATGCAAGAAGATTCCAAATACAGAGGCTTTCTGAGTATTGCTGAGGCCCTGCATCTCACTGCAAAACGCACGGTGGCTATAATTGGCCCGCAAACCTCCGTGACAGCTCATGTGATATCTCATATTGCAAACGAGCTCCAAGTTCCCCTGCTATCAGTTTCAGCGACGGACCCCACACTCTCTTCCCTTCAATTCCCATTCTTCGTCAGAACTGCGCATAGTGATCTTTATCAGATGACCGCCATTGCGGAGCTTGTTGACCACTACGGGTGGAGAGAGGTGATTGCAATCTATGTAGACGATGATCATGGAAGAAATGGGATCAGTGTCTTAGGAGATAAGCTTGCTGAGAGACGGTGCAGGATCTCTTTTAAAGCTCCTATGAGCCCTGAAGCAACGAGGGAGGAGATTACGAATGTTCTTGTTCACGTGGCTTTGGCAGAGTCTAGGGTAATAGTTCTACACGCCAATGCTGCTTGGGGACCCAAGGTGTTTAGAGTGGCAAAGTATCTGGAGATGATGGGATCTGGGTATGTTTGGATAGCCTCTCATTTTCTCTCTACTCTTCTGGATACAAATGGTCCACTCCCTCACGAAACAATGGAGATGATTCAAGGGGTTCTTACTCTGCGTATCTACACACCTGATTCAGAGCTCAAACGAAGATTTGTTTCCAGGTGGAAAAACGTGACTCGCCTCGGACTGAGTAGTTATGCTCTTTATGCATATGATACTGTTTATGTGCTTGCTCGTGCGCTCGATAGTTTCTTCAAACAACGGAATCGAATAACATTCTCGTATGATCCCAAATTGTCAGAGCTGCATGACAACAACTTGAATCTTGATTCTCTGGGCATCTTCGATGAAGGGAAGGTGTTGAGACAAAGTATCTACGAGGTTGATATGGCAGGAGTAACTGGTACTTTCAAGTATGCATCTGACGGAAACCTTGTGAATCCGGCATATGAAATCCTCAATGTGATCGGGACAGGAAGTAGGAGAGTTGGTTATTGGAGTAACTACACGGGATTATCAGTTGTTGCTCCAGAAGCACTCTATGCACACCCGCCCAATCGTTCAGCGGCGAGTCAGAAGCTACGGCCAGTGATTTGGCCAGGGGACACAGCGCAGAAACCTCGTGGTTGGGTTTTTCCAAACAGTGGGAGGCTCTTAAAAATTGGAGTGCCAGTAGGTTTTAGTTACCGTCAATTTGTATCACATGTACAGGGCACTGACATGTTCAAGGGCTTCTGCATTGACGTGTTTCTTTCTGCACTCAACTTGCTGCCTTATGGCGTGCCTTATAGGCTTGTTCCATTTGGGGTTGGTCACAACAATCCTAACGGCAACGAGCTTGTTCGTTTGGTGGCGGCGGGCGAATTTGATGGAGCGGTTGGTGACATTACAATTACTACGCAGCGAACAAGGATGGTAGATTTCACTCAGCCATTTATTGGGTCTGGTCTGGTGGTTGTGGCCCCGGTTAGGAAGTCAGACTCCAGTGCTTGGGCCTTTCTGAGACCCTTTAGTCTGGAGATGTGGGGCGTCACCGCCATCTTTTTCCTGGCTGTTGGAGCCGTTGTTTGGATTTTGGAGCATAAATTCAATGATGAATTCCGGGGACCTCCCAGAAAACAATTTGTTACAGTTTTGTGGTTCAGTTTTTCAACCATGTTTTTCGCCCACAGGGAAAATACAGTGAGCACACTTGGTCGGTTTGTGCTTCTGATATGGTTGTTTGTGGTACTTATAATAAACTCGAGTTACACGGCGAGCCTGACCTCAATCCTCACAGTGCAGCAGCTTTATTCTCCCATTAAAGGCATTGAAACTTTGGTTGCCAGCGAAGAGCCGATCGGCTACCTGCAGGGTTCATTCAGTAGAAACTATCTAATAGAGGAAATTGGGATTGATGAGTCAAGACTTGTTCCTCTGAGGACACCGGAAGAGTCGGCTAAAGCATTAAGAGATGGACCCAAGAAGGGTGGTGTCGCCGCGTACGTTGATGAGCGTGCTTACATTGAACTCTTCCTCTCAAGCCGATGTGACTTGGCCATAGTAGGTCAAGAGTTTACCAGAAACGGTTGGGGATTTGCATTTCCACGGGACTCGCATCTGGCGGTTGACTTGTCGACGGCTATATTGAAAATGGCAGAGAACGGAGATCTGCAAAGGATTCATGACAAGTGGCTTCTGAACATCGCCTGCCTGTCACAAAATGCAAAGTTTGAAGTGGACAGACTTCGGCTGAAAAGCTTTTGGGGGCTCTATCTGATCTGCGGGGTGGCGTGCGTGCTCGCATTATTAGCATATATCATACAGATGATGAGGCAGTTCAAGAAGCACTACGTGGCGGAGGTTGATTCATGTGCCGGATCTTCTTCCAGCATTCGCACTTTCCTTACATTTGCAGACCAGAAAGAATCTGAAGTCAAAAGCCGATCCAAGAGAAGGCAGATGGAGAAGTCAAATGCTGGCGGATCTTCCATCAGAAGCATCCATTCTGCCGCTCAAGCCTGA 2742 0.4697 MAGVWSVVLMILFHIFSSTEAASNHSTRPDSVNIGVLYSFNTTVGQIVKTAIEAAIEDVNFDPSILGETKLKVSMQEDSKYRGFLSIAEALHLTAKRTVAIIGPQTSVTAHVISHIANELQVPLLSVSATDPTLSSLQFPFFVRTAHSDLYQMTAIAELVDHYGWREVIAIYVDDDHGRNGISVLGDKLAERRCRISFKAPMSPEATREEITNVLVHVALAESRVIVLHANAAWGPKVFRVAKYLEMMGSGYVWIASHFLSTLLDTNGPLPHETMEMIQGVLTLRIYTPDSELKRRFVSRWKNVTRLGLSSYALYAYDTVYVLARALDSFFKQRNRITFSYDPKLSELHDNNLNLDSLGIFDEGKVLRQSIYEVDMAGVTGTFKYASDGNLVNPAYEILNVIGTGSRRVGYWSNYTGLSVVAPEALYAHPPNRSAASQKLRPVIWPGDTAQKPRGWVFPNSGRLLKIGVPVGFSYRQFVSHVQGTDMFKGFCIDVFLSALNLLPYGVPYRLVPFGVGHNNPNGNELVRLVAAGEFDGAVGDITITTQRTRMVDFTQPFIGSGLVVVAPVRKSDSSAWAFLRPFSLEMWGVTAIFFLAVGAVVWILEHKFNDEFRGPPRKQFVTVLWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLYSPIKGIETLVASEEPIGYLQGSFSRNYLIEEIGIDESRLVPLRTPEESAKALRDGPKKGGVAAYVDERAYIELFLSSRCDLAIVGQEFTRNGWGFAFPRDSHLAVDLSTAILKMAENGDLQRIHDKWLLNIACLSQNAKFEVDRLRLKSFWGLYLICGVACVLALLAYIIQMMRQFKKHYVAEVDSCAGSSSSIRTFLTFADQKESEVKSRSKRRQMEKSNAGGSSIRSIHSAAQA 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2479 913 FunFam Glutamate receptor 460 576 - -
Alju09g2479 913 MobiDBLite consensus disorder prediction 885 913 - -
Alju09g2479 913 FunFam Glutamate receptor 148 310 - -
Alju09g2479 913 Pfam Ligand-gated ion channel 806 838 IPR001320 GO:0015276|GO:0016020
Alju09g2479 913 Gene3D - 465 575 - -
Alju09g2479 913 FunFam Glutamate receptor 576 706 - -
Alju09g2479 913 Gene3D - 576 694 - -
Alju09g2479 913 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 881 IPR015683 -
Alju09g2479 913 Gene3D - 50 393 - -
Alju09g2479 913 SUPERFAMILY Periplasmic binding protein-like I 27 457 IPR028082 -
Alju09g2479 913 CDD PBP1_GABAb_receptor_plant 33 422 IPR044440 -
Alju09g2479 913 PRINTS Metabotropic glutamate GPCR signature 133 152 IPR000337 GO:0004930|GO:0007186|GO:0016020
Alju09g2479 913 PRINTS Metabotropic glutamate GPCR signature 101 127 IPR000337 GO:0004930|GO:0007186|GO:0016020
Alju09g2479 913 PRINTS Metabotropic glutamate GPCR signature 168 185 IPR000337 GO:0004930|GO:0007186|GO:0016020
Alju09g2479 913 PRINTS Metabotropic glutamate GPCR signature 152 168 IPR000337 GO:0004930|GO:0007186|GO:0016020
Alju09g2479 913 SMART GluR_14 466 807 IPR001320 GO:0015276|GO:0016020
Alju09g2479 913 CDD GluR_Plant 465 805 - -
Alju09g2479 913 Gene3D - 695 807 - -
Alju09g2479 913 Pfam Receptor family ligand binding region 48 403 IPR001828 -
Alju09g2479 913 FunFam Glutamate receptor 702 809 - -
Alju09g2479 913 MobiDBLite consensus disorder prediction 896 913 - -
Alju09g2479 913 Gene3D - 148 418 - -
Alju09g2479 913 Pfam Bacterial extracellular solute-binding proteins, family 3 522 805 IPR001638 -
Alju09g2479 913 SUPERFAMILY Periplasmic binding protein-like II 443 806 - -
Alju09g2479 913 PIRSF IGluLR_plant 2 912 IPR017103 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2479 Alju-ChrAlju09 47629558 47632782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2479 5 903 Ion Channels AT3G51480 58.960 0.0 1121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2479 09 47629558 47632782 Alju12g1766 12 38786202 38792140 CCT
Alju09g2479 09 47629558 47632782 Alju09g2479 09 47629558 47632782 ECH
Alju12g1766 12 38786202 38792140 Alju09g2479 09 47629558 47632782 ECH