Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2477 ATGAAATTTCGATTTCTCTGCACACCACGTCTTGTGATCATATTGCTAATCGTCTTTTGCTCGAGCTTAACCGGCGACGTCTCTGTATCAGAGTCAGAGAGCTCCCAAGTCTCATTTGCAGGCAATAGTGATGTAGACTTCAAGGGCCTAGCGTTACCTGCTAGCCGCTCTCCTCTGTCTCCTCCAGCTAAGCCTAGCACGGTACTGATTGTTGCCCCAGATCAAAATGGGACAATACATTTGGTGGAGAGCGGTTCCATGAGGATAATATGGTCATTTCCAACAGGATCACCAATTTACAAGTCATATCAAGCTACTCTCAACAAGGATAATGATAAAGAAAATGCATCTGGACCAAGTAATGAGTTCATAGATGTAGGAGATGACTGGAGTTTATATCAAAGAAAGTCCTTTGGTAAAATGAGACTCTTGACATCTATTGAAGATATTGTTAAAGCTACGCCTAAATTATCAAATGATGGAGTTGTTACACTTGGATCTAAAAGAAGTACTGTTTTTGAAGTTGATGCTAAAACTGGAAGGATCTTTCAAAGTTACAGTGCTTCGGATTTTGATAATGCCTTTGCACTGTGGAGTGAAGACAGGCAAAGTGTTCAAAATGTTCTCACTACTAAGAATGAGGAGCTGGCAAAGTCTGATCCTCTTAAGCTTCATATGCCAAAGCCGCTACTAATGTTATTTAGGACAGATTATTCTCTACAAGCTGTTAGTCCTGGATCAGACAAAGTTGTATGGAGTATGGCAATAGCTGAATTTGAGGCTGTGTTACATTGCCAACATAATGAAAATCCAATTGATGGGGCATTATTTGATTCAGGGGGCAAGCATACTTGTGATGCTGGCCTTGATTTTGCTTTGCCATACCCATGTTGGGTGAAGAAAAAAGTATACCGTCTACCAAAAAACTTTCTGGTACAACCTTCAATTGTTGAGAGATTACCTGAGGCTAATTATGATAACGAAATGCTCCCAGTGCCCACTTCGGAACTGATGCTTCCTGTGCAGCCCAATAGTGATAGATATTTAAAAGGCCATGATAATATTATGATGCTTCCCATGCCTGTGCCAACTTTGTTACCTCCTCTTCTTCCAGAAATGGTCAATAGTGATGACACATTTGAGCTTGCTCAGCCTGGGACACAGATTACAACACGTGAGGAAGTTAGTCTGAAGAAAGAGATTTCATGGTCATTAAGTTTGGCTCTGGTGCTGTGGATAGTCTCTTTCCTGGTCTGGATAACTTTTGGGTTAGTTAAAAAGCCATTGAAATTGAAAGGCCAAAATAGTGAGCTTGATTTAAATAGTACTCTTAAGAAAAGGAAAACAGGAAAGTCAGGAAAGAACAATGGAATTGTTGACAAGAAGGTTAAGCCATTGGTATTAGAAGACCACAAAGTAATGCCTCATGGTAGAGATGATAAGGAACCTCTGCAGTATGTTAATAAAGTCGATGGATGTACTGATGGGCGCAAGATTGGTAAACTATTTGTATCAAATAAAGAAATTGCCATGGGAAGCAATGGAACCATTGTTCTAGAGGGAACATATGAGTGTCGAGAAGTTGCTGTAAAACGTCTTGTCCAGGCTCATCATAATGAGGCCTTTAAAGAAATTCAAAACCTTATTGCATCTGACAATCACCCAAACATTGTTCGATGGTATGGGGTGGAAAATGATCAAGATTTTGTCTACCTTGCATTGGAGCGTTGTTCATGTAACTTAGGTGATTTAATTCAGATTTACACGGATATAGCGGAAAACTCAGCGTTTAGCGAGAACCAAACTTTAAAGGCTCAATTGGAGATAGGAAAGCAAAATATGCAGATTCTTTGGAAAGCAAATGGCTTCCCATCGCCTCTCCTATTGAAGCTAATGAGGGATATAGTTTCAGGGCTTTGTCATTTGCATGAACTGGGAATAGTACATCGGGATTTGAAACCTCAAAATATTTTGATAATCAATGAAAGATCTTTATGTGCAAAGCTTTCTGATATGGGCATTAGTAAACGTCTTTTTGAAGATATGTCATCTTTTGGTCATAATGGTACTGGATGTGGTAGTTCAGGCTGGCAAGCTCCAGAACAACTTGTTCAAGGACGTCAAACACGGGCTGTAGATTTATTTAGTCTAGGTTGTGTCTTATTTTTTTGTTTAACTGGGGGAAGACATCCATTTGGAGAACGTCTTGAACGTGATCTTAATATTGTGAGAAATCAAAAGGATCTTTTCTTAGTGGATTTCATTCCTGAAGCAGAGGGTCTTATTTCTTGTCTATTAGACCCTGAGCCTAATCTAAGGCCCAAAGCAGTTGAAGTTCTGCACCATCCTTTCTTTTGGGATTCTGAAATGAGACTTTCTTTTCTTCGAGATGCCAGTGATAGAGTGGAATTGGAAGATAGGGAGACTAATTCTGATCTTTTGAAGGCATTGGAAGGTAGTGCACTGGTGGCTTTAAATGGGAACTGGGATGAAAAGATGGAACCAGCATTCATTGGTAACATCGGCCGTTACCGGCGATATAAATATGACAGTGTTCGAGATTTGTTACGAGTCATCAGAAACAAGCTGAATCACTTTAGAGAATTGCCTCAGGAAATTCAGGAACTTGTAGGACCTATTCCAGAAGGATTCAATCACTACTTTGCAAGTCGGTTCCCTAGACTCCTAATTGAAGTGTATAAAGTCATGTGCAGATATTGCAAAACTGAGGAATGTTTTCAGCGGTACTTTAAAACCGTTCAGTAG 2766 0.3988 MKFRFLCTPRLVIILLIVFCSSLTGDVSVSESESSQVSFAGNSDVDFKGLALPASRSPLSPPAKPSTVLIVAPDQNGTIHLVESGSMRIIWSFPTGSPIYKSYQATLNKDNDKENASGPSNEFIDVGDDWSLYQRKSFGKMRLLTSIEDIVKATPKLSNDGVVTLGSKRSTVFEVDAKTGRIFQSYSASDFDNAFALWSEDRQSVQNVLTTKNEELAKSDPLKLHMPKPLLMLFRTDYSLQAVSPGSDKVVWSMAIAEFEAVLHCQHNENPIDGALFDSGGKHTCDAGLDFALPYPCWVKKKVYRLPKNFLVQPSIVERLPEANYDNEMLPVPTSELMLPVQPNSDRYLKGHDNIMMLPMPVPTLLPPLLPEMVNSDDTFELAQPGTQITTREEVSLKKEISWSLSLALVLWIVSFLVWITFGLVKKPLKLKGQNSELDLNSTLKKRKTGKSGKNNGIVDKKVKPLVLEDHKVMPHGRDDKEPLQYVNKVDGCTDGRKIGKLFVSNKEIAMGSNGTIVLEGTYECREVAVKRLVQAHHNEAFKEIQNLIASDNHPNIVRWYGVENDQDFVYLALERCSCNLGDLIQIYTDIAENSAFSENQTLKAQLEIGKQNMQILWKANGFPSPLLLKLMRDIVSGLCHLHELGIVHRDLKPQNILIINERSLCAKLSDMGISKRLFEDMSSFGHNGTGCGSSGWQAPEQLVQGRQTRAVDLFSLGCVLFFCLTGGRHPFGERLERDLNIVRNQKDLFLVDFIPEAEGLISCLLDPEPNLRPKAVEVLHHPFFWDSEMRLSFLRDASDRVELEDRETNSDLLKALEGSALVALNGNWDEKMEPAFIGNIGRYRRYKYDSVRDLLRVIRNKLNHFRELPQEIQELVGPIPEGFNHYFASRFPRLLIEVYKVMCRYCKTEECFQRYFKTVQ 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2477 921 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 789 921 - -
Alju09g2477 921 Gene3D KEN domain 788 921 IPR038357 -
Alju09g2477 921 ProSiteProfiles KEN domain profile. 788 919 IPR010513 GO:0004540|GO:0006397
Alju09g2477 921 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 610 787 - -
Alju09g2477 921 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Alju09g2477 921 Gene3D Transferase(Phosphotransferase) domain 1 608 787 - -
Alju09g2477 921 Pfam Ribonuclease 2-5A 791 917 IPR010513 GO:0004540|GO:0006397
Alju09g2477 921 SUPERFAMILY Protein kinase-like (PK-like) 498 799 IPR011009 -
Alju09g2477 921 Pfam Protein kinase domain 505 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2477 921 SMART PGNneu 850 904 - -
Alju09g2477 921 CDD RNase_Ire1 789 917 - -
Alju09g2477 921 ProSiteProfiles Protein kinase domain profile. 503 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2477 921 SMART serkin_6 503 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2477 921 PANTHER IRE1-RELATED 142 919 IPR045133 GO:0004521|GO:0004674|GO:0030968
Alju09g2477 921 Gene3D Phosphorylase Kinase; domain 1 489 575 - -
Alju09g2477 921 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 495 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2477 Alju-ChrAlju09 47623917 47628840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2477 529 784 MAP Kinase Kinase Kinase AT3G06030 29.615 1.00e-23 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Alju09g2477 Pkinase 1.4e-38 CL0016