Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2476 ATGTCGCCGAAGCCTGCGTCCGCTTCGAACTCAAACCCCTACTTCAAACCCGGCTCCGCCGTCGAGGTAAGCCCCGACGATGAAGGATTTCGCGGATCTTGGTTTGTTGGCACCATTATTCGCCGCTGCACTTCCAAGAAAAACCAGAACAAATTCTTGGTGGAGTATAAAACCATCATGGCCGACGAGAAGGGTTCTAAACCCCTAAGAGAGATGCTGGACATTCACCAGCTTCGACCCCTCGCCCCGAGGGAGACTGACCGCCAATTCAAGTTCGGCGAGGAGGTCGATGCTTACCAGAACGATGGCTGGTGGGAAGGCTCCATAACCGAAGAATTGGGTAACGGGAGGTTCGCGGTGTATTTCAGGGCTTCAAAGGAGCAGATTGAGTTCGGGAAGGAGGACCTTAGGCTTCATCGCGAGTGGGTCAATGAGAATTGGGTCCCTCCATTGGAAGAACCATCGAAGGAAAAGAAAAAATTGACAAACGATGTGAAGGCTAGTGAAGAAACAGTGACGGACATGTTTAGCAAGGGGACACTAGTTGAGGTTAGCAGTGATGAGGAAGGTTTTGAAGGAGCTTGGTTTGCTGCTACTGTTGTTCAACCAAAGGGAAAGGATAAGTTTCTTGTTGAGTATATGAACCTGCGGACTGACGATGATTCAGAGTTTTTGAGGGAGGAGATTGATATCTTACATATTCGGCCTTACCCACCAGAACATGTTTGTGATCAGTTTAATCTTCTTCAAGAAGTTGATGCTTTGTGCAATGACGGATGGTGGGTTGGAGTGATTTCCAAAGTTCTCAGCAACTCAAGGTATGTAGTATACTTCAGGAACAGCAATGAAGAATTAGAGCTTCCGCACTCTGAGATAAGGCTACATCAGGACTGGATCAACGGAAAGTGGGTAATTGCTTCTAAGGTTCAAATTCTGCATGAGCCAAGTCTCTCCTTTGATGTGAAGATTTTGTTGGCGGTTAGTTCTTGGAAAAATATTCAAACTAGTAAAAAAATGGGCAAGTCATGTGGATTGGTCCATTTGAATGTGGACTTAGTGGAATGGGTCAAGGTCATCTTGGAATTACATTGATTTGCTCGGCTCTTCTTGACCATCTTATTTTTCAACTCATCTGATGAACAGAAGCATGCCACGTCCTACGATAATGTTAAAGTCTTTGACTCTCTGTTCTCTGTTTGGCTTCTTGCATCACGCGTAATCTATCTCCCTCAGCTCCTCTTTTTTGCTGCCATGGGGTGA 1260 0.4603 MSPKPASASNSNPYFKPGSAVEVSPDDEGFRGSWFVGTIIRRCTSKKNQNKFLVEYKTIMADEKGSKPLREMLDIHQLRPLAPRETDRQFKFGEEVDAYQNDGWWEGSITEELGNGRFAVYFRASKEQIEFGKEDLRLHREWVNENWVPPLEEPSKEKKKLTNDVKASEETVTDMFSKGTLVEVSSDEEGFEGAWFAATVVQPKGKDKFLVEYMNLRTDDDSEFLREEIDILHIRPYPPEHVCDQFNLLQEVDALCNDGWWVGVISKVLSNSRYVVYFRNSNEELELPHSEIRLHQDWINGKWVIASKVQILHEPSLSFDVKILLAVSSWKNIQTSKKMGKSCGLVHLNVDLVEWVKVILELHXFARLFLTILFFNSSDEQKHATSYDNVKVFDSLFSVWLLASRVIYLPQLLFFAAMG 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2476 419 CDD Tudor_Agenet_AtDUF_rpt1_3 176 239 - -
Alju09g2476 419 CDD Tudor_Agenet_AtDUF_rpt1_3 15 83 - -
Alju09g2476 419 CDD Tudor_Agenet_AtDUF_rpt2_4 248 294 - -
Alju09g2476 419 MobiDBLite consensus disorder prediction 1 17 - -
Alju09g2476 419 Gene3D - 166 247 - -
Alju09g2476 419 Pfam Agenet domain 18 83 IPR008395 -
Alju09g2476 419 Pfam Agenet domain 250 293 IPR008395 -
Alju09g2476 419 Pfam Agenet domain 93 151 IPR008395 -
Alju09g2476 419 Pfam Agenet domain 179 239 IPR008395 -
Alju09g2476 419 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 169 346 - -
Alju09g2476 419 MobiDBLite consensus disorder prediction 1 25 - -
Alju09g2476 419 CDD Tudor_Agenet_AtDUF_rpt2_4 93 138 - -
Alju09g2476 419 SMART agenet_At_2 174 242 IPR014002 -
Alju09g2476 419 SMART agenet_At_2 13 86 IPR014002 -
Alju09g2476 419 SMART agenet_At_2 88 144 IPR014002 -
Alju09g2476 419 SMART agenet_At_2 244 300 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2476 Alju-ChrAlju09 47604639 47610974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2476 186 314 PHD Transcription Factor Family AT5G58610 27.848 1.59e-09 58.2