Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2462 ATGCTGTCTCTGGGTCCCAGACGATGGATAAACACAGATGAAGGTTTTGACCCAACTCTCACGCGGTCGTTGACCTTAATCCGAGAAGGGCGAGGCTTTATAGCTATTTTAATGGCAGCAGAAAAAGGGGGTGTGAAAGGGAACAAACAAACAAACAAATACAAGAAAATACGAAACTTCGATGGTAAAGCTTTGCGGGAGCAATTTTATGCTAGCGTTATCGGCTGGGAGCTTGATATGGGTCTGTGCTTTGGGTCTCTCGCCCACGACGACGGAGCGGCGTCTAGTATCAACAGAAATCCATATTCAGGTTCAGCGAGTACTGACAGTAAGAACGTTGGGTTCTCTACTACGAACAGCAGTGCCGCAAAGAGTCAATTTTCAGAACTAGCAAGTGGGAACCTCGGCGATTCCCTTCCTGCTCCCAGTGGGCAAATTCTAGAAACTCCAAACCTGAAGGTATTTAGTTTTGTAGACTTGAAAGCAGCCACGAAGAACTTCAAACACGATACATTGCTTGGTGAAGGTGGTTTTGGTAGAGTTTACAAAGGTTGGCTGGATGAGAAGACACTGATACCATCTAAGGCGGGGTCTGGAATTGTGGTTGCTATTAAAAAATTGAACCCAGAAAGTATGCAAGGATTCCAAGAGTGGCAGTCAGAAGTCAATTTCTTAGGAAGGCTTTCCCATCCCAACTTGGTCAAGCTATTGGGTTACTGTTGGGATGCTGAGGAGCTGCTGCTTGTGTATGAGTTCATGCCAAAGGGAAGTTTGGAGAATCATCTCTTCAGAAGAAATCCTAACATTGAACCACTTTCTTGGAACAAGCGACTCAAAATAGCTATTGGTGCAGCTCGAGGCCTGGCCTTTTTGCACACTTCAGAAAAGCAAGTGATATACCGAGATTTCAAGGCCTCAAATATACTACTTGATGGGAACTATAATGCAAAAATTTCTGACTTTGGCTTGGCGAAATTGGGGCCATCAGGGGGAGAATCACATGTTACAACTAGGGTTATGGGCACTTATGGCTATGCGGCTCCAGAATATGTTGCTACAGGGCACTTGTATGTGAAGAGCGATGTGTATGGATTTGGTGTAGTGCTGCTTGAAATGCTGACAGGTTTGAGGGCACTTGATACGAAGCGACCAAGTGGGCAGCAGAATCTGGTTGAATGGGTGAAGCCGTATCTGTCCAGCAAGAGAAAGTTGAAAACAATTATGGACGCTAGGATTCAGGGTCAATATTCACTCAAGACAGCATCACAGGCTGCTAAGCTTACTCTCAAATGCCTACAACCCGATCCTAAGAACCGTCCTTCCATGAAAGAAGTAGTTGAGGAATTGGAAGGCATTGAAGAATCAAAGACCAAGTAA 1377 0.451 MLSLGPRRWINTDEGFDPTLTRSLTLIREGRGFIAILMAAEKGGVKGNKQTNKYKKIRNFDGKALREQFYASVIGWELDMGLCFGSLAHDDGAASSINRNPYSGSASTDSKNVGFSTTNSSAAKSQFSELASGNLGDSLPAPSGQILETPNLKVFSFVDLKAATKNFKHDTLLGEGGFGRVYKGWLDEKTLIPSKAGSGIVVAIKKLNPESMQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDAEELLLVYEFMPKGSLENHLFRRNPNIEPLSWNKRLKIAIGAARGLAFLHTSEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPSGGESHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEMLTGLRALDTKRPSGQQNLVEWVKPYLSSKRKLKTIMDARIQGQYSLKTASQAAKLTLKCLQPDPKNRPSMKEVVEELEGIEESKTK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2462 458 MobiDBLite consensus disorder prediction 435 458 - -
Alju09g2462 458 SUPERFAMILY Protein kinase-like (PK-like) 143 450 IPR011009 -
Alju09g2462 458 Gene3D Transferase(Phosphotransferase) domain 1 253 458 - -
Alju09g2462 458 FunFam Serine/threonine-protein kinase PBS1 253 458 - -
Alju09g2462 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 298 310 IPR008271 GO:0004672|GO:0006468
Alju09g2462 458 FunFam Serine/threonine-protein kinase BIK1 137 252 - -
Alju09g2462 458 PANTHER OS01G0588500 PROTEIN-RELATED 117 453 - -
Alju09g2462 458 ProSitePatterns Protein kinases ATP-binding region signature. 173 206 IPR017441 GO:0005524
Alju09g2462 458 Gene3D Phosphorylase Kinase; domain 1 151 252 - -
Alju09g2462 458 Pfam Protein tyrosine and serine/threonine kinase 170 449 IPR001245 GO:0004672|GO:0006468
Alju09g2462 458 CDD STKc_IRAK 173 452 - -
Alju09g2462 458 MobiDBLite consensus disorder prediction 440 458 - -
Alju09g2462 458 ProSiteProfiles Protein kinase domain profile. 167 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2462 Alju-ChrAlju09 47499313 47505847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2462 153 449 Glycoside Hydrolase AT3G07070 51.678 7.65e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Alju09g2462 PK_Tyr_Ser-Thr 7e-49 CL0016