Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2439 ATGGGGATATCACAAAAATGGCTGAAAATAGTTGGTAGAAAATTCCCGGGCTCATGCAATAGAAGATATATAATTATTCCCCGCACAAGCACCAGCACAATTTGCTCAAATGAAAGCGATAAAGCCTCTCCCGGGAATGAAACGTCCCCATTTGAAGAGCATGGCTTGCCGGCCTACACAAAAGAAGTCGCAGCAATTAAGATTCAGGCTTGTTTCAGGGGTCACCTGGCAAGAAGGGCATATCGAGCTCTTAGAAGTCTGGTCAAGCTGCAAGCACTGGTTCGTGGGGTATTCGTGAGGAGACAATCGCGCATAGCGTTGCACTGTATGCATGTACTCGTTCGCTTACAGGTCAGGATTCGTGCAAGGCAGCTTCTTGGTGGATCTCTCCCTCACTGA 399 0.4787 MGISQKWLKIVGRKFPGSCNRRYIIIPRTSTSTICSNESDKASPGNETSPFEEHGLPAYTKEVAAIKIQACFRGHLARRAYRALRSLVKLQALVRGVFVRRQSRIALHCMHVLVRLQVRIRARQLLGGSLPH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2439 132 SMART iq_5 60 82 IPR000048 GO:0005515
Alju09g2439 132 SMART iq_5 83 104 IPR000048 GO:0005515
Alju09g2439 132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 105 IPR027417 -
Alju09g2439 132 Pfam IQ calmodulin-binding motif 64 82 IPR000048 GO:0005515
Alju09g2439 132 Pfam IQ calmodulin-binding motif 85 102 IPR000048 GO:0005515
Alju09g2439 132 Gene3D - 61 109 - -
Alju09g2439 132 PANTHER IQ-DOMAIN 5-RELATED 49 124 - -
Alju09g2439 132 ProSiteProfiles IQ motif profile. 85 111 IPR000048 GO:0005515
Alju09g2439 132 ProSiteProfiles IQ motif profile. 61 89 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2439 Alju-ChrAlju09 47237901 47238402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2439 57 127 IQD Protein Family AT3G51380 75.000 7.37e-32 107