Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2438 ATGGCGATCGAGGAGGACCTTGAGAGCTGTGGAAGCAGAGCCTGTGTCCAGTCATCGCAAGCTCATCCTCGCCACCAGAGGAAGAAATTGGAGGTGTACAATGAGGTGCTACGTCGAATTCAAGAGTCAAATTGGGAGTATGCCAATGTTCCAGGGTTTGATGATCAGCTTTGGCTTCATTTCAATCGTCTTCCTGCTAGGTACGCGTTGGATGTGAATGTGGAGAGGGCAGAAGATGTTCTTAGTCATAAGAGATTGCTGAAGTTGGCCGAGGACCCTGCTAATCGACCTGTATTTCAAGTTCGCTCAGTCCAGGTATATCCTTATGGATGTGCTAATTTTGCTGACTCAGCGCATTCTGATCCTTCTGAGAAAGAAGATGCGCAGAGTTCTTTTTTTAAGCAGGGAGTTCATCCACCACCTACTTTTGGTTCATCTTCTAATCTCGAAGTTCTTTCCCGCCAAGCGTGTAAAAATAATGCTGAAGACGGGGATGGGGATATGGATTCGACACCATGCTTTTACAGGCCCATGCACGAGGTTACCTTCTCGACAGTTGACAAGCCTAAAGTCCTTAGTCAGTTAACTTCATTGCTTGGGGAGATGGGACTGAACATTCAAGAAGCTCATGCATTTTCCACTACAGATGGGTTTTCTCTTGATGTCTTTGTTGTTGAAGGGTGGCCAAATGAGGAAACCGAGGAGCTTAAACGCGTATTGGAAAAGGAGATTTTGAAGTTTAAGCGGGATCAACATCTATCAAAACAGGGCATGCCTTCTGCTGCCATTGAACATTATTATCAGGCAAGGATGGAACCCTTCCCTCATTGTGTAGAAATACCATCTGATGGAACCGATGTCTGGGAAATTGATACCAACCAGCTGAAATTTGAAAACAAAGTTGGCTCTGGGTCATTCGGTGATTTGTACAGAGGTACTTATTGCAGTCAAGATGTAGCTATCAAAGTCCTTAAGCCTGACAAAATAAATACAGAGATGTTGAGAGAATTTGCCCAGGAAGTTTATATCATGAGGAAAATTCGACACAAGAATGTTGTTCAGTTCATTGGAGCATGCACTCAGCCACCAAATCTGTGTATTGTTACTGAGTTTATGTCTAGAGGAAGCGTCTATGACTTTCTGCACAAACAAAGGGGTGTGTTTAAGCTTCCTTCTTTACTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATCCACCGGGACCTCAAGACTGCCAATCTTCTAATGGATGAAAATGAAGTGGTAAAGGTTGCCGATTTTGGGGTTGCCAGAGTGCAAACTCAATCTGGAGTGATGACAGCTGAAACTGGAACGTACCGTTGGATGGCTCCTGAGGTCATTGAACACAAACCGTATGACCAGAAGGCAGATGTTTTTAGTTTTGGAATAGCTCTTTGGGAGCTTCTGACAGGAGAATTGCCTCATGCTTACCTGACCCCATTACAAGCAGCAGTAGGCGTGGTGCAGAAGGGTCTACGACCTTCAATCCCCAAGAATGCACACCCTAGGCTTTCGGAACTGCTCCTGCGATGTTGGCAACAAGATCCAATTGAGAGACCGAATTTCTCAGAAATATTGGTAATTCTTCAGCAGATAGCAGGTTGCTGA 1653 0.4428 MAIEEDLESCGSRACVQSSQAHPRHQRKKLEVYNEVLRRIQESNWEYANVPGFDDQLWLHFNRLPARYALDVNVERAEDVLSHKRLLKLAEDPANRPVFQVRSVQVYPYGCANFADSAHSDPSEKEDAQSSFFKQGVHPPPTFGSSSNLEVLSRQACKNNAEDGDGDMDSTPCFYRPMHEVTFSTVDKPKVLSQLTSLLGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELKRVLEKEILKFKRDQHLSKQGMPSAAIEHYYQARMEPFPHCVEIPSDGTDVWEIDTNQLKFENKVGSGSFGDLYRGTYCSQDVAIKVLKPDKINTEMLREFAQEVYIMRKIRHKNVVQFIGACTQPPNLCIVTEFMSRGSVYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPHAYLTPLQAAVGVVQKGLRPSIPKNAHPRLSELLLRCWQQDPIERPNFSEILVILQQIAGC 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2438 550 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 147 547 - -
Alju09g2438 550 SUPERFAMILY Protein kinase-like (PK-like) 271 542 IPR011009 -
Alju09g2438 550 Gene3D Phosphorylase Kinase; domain 1 284 373 - -
Alju09g2438 550 Gene3D Transferase(Phosphotransferase) domain 1 374 549 - -
Alju09g2438 550 CDD ACT_TyrKc 178 245 - -
Alju09g2438 550 SMART serkin_6 295 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2438 550 ProSitePatterns Protein kinases ATP-binding region signature. 301 322 IPR017441 GO:0005524
Alju09g2438 550 Coils Coil 230 250 - -
Alju09g2438 550 FunFam Serine/threonine-protein kinase isoform 1 285 373 - -
Alju09g2438 550 SUPERFAMILY ACT-like 178 243 IPR045865 -
Alju09g2438 550 ProSiteProfiles Protein kinase domain profile. 295 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2438 550 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Alju09g2438 550 ProSiteProfiles ACT domain profile. 180 260 IPR002912 -
Alju09g2438 550 Pfam Protein tyrosine and serine/threonine kinase 295 542 IPR001245 GO:0004672|GO:0006468
Alju09g2438 550 PRINTS Tyrosine kinase catalytic domain signature 515 537 IPR001245 GO:0004672|GO:0006468
Alju09g2438 550 PRINTS Tyrosine kinase catalytic domain signature 369 382 IPR001245 GO:0004672|GO:0006468
Alju09g2438 550 PRINTS Tyrosine kinase catalytic domain signature 471 493 IPR001245 GO:0004672|GO:0006468
Alju09g2438 550 PRINTS Tyrosine kinase catalytic domain signature 452 462 IPR001245 GO:0004672|GO:0006468
Alju09g2438 550 PRINTS Tyrosine kinase catalytic domain signature 406 424 IPR001245 GO:0004672|GO:0006468
Alju09g2438 550 MobiDBLite consensus disorder prediction 118 148 - -
Alju09g2438 550 CDD STKc_MAP3K-like 301 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2438 Alju-ChrAlju09 47223360 47236817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2438 1 547 MAP Kinase Kinase Kinase AT4G35780 72.131 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Alju09g2438 PK_Tyr_Ser-Thr 2e-73 CL0016