LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju09g2424	ATGGATGATCGGCACCGCAATTTATTGGCTGCTCCACCGTCAGAAATGGAAAAGCCTACCAATTCCAAAAGCAGTTACTGCCAAAGTATGTTGATAGGGTCAGTTTGTGGCATTTTATTTTTAACAGTAATGATAGTTGCATTGTTGTACTGCATCTTCAAGAGAAAGGGTATTCCACTTGAATGCAGGAGTTCGAAAGGTGCAGAAGATGAAAAGAGTTTGAAATATGGTAAGATATCGTTGAGGCGTTTTGATTTGGAGGAACTAGAGAAGGCTACAGATAATTTTAGCCCAGATTGTTTGCTGGGTTCTGGTGCTTTTGGAACGGTGTATAAAGGAACCTTTGAATTAGAAGGAACATTAGCCATTAAAAGAGCTCATGGTGAATCATTCTTAAGCAAGGCAGAGTTCATAAATGAAGTGAGGCTTATTTCGAAAGTAAAGCACAGGAATCTTGTTAGTCTGGTGGGATATTGTGAAGAGCCTGGAGATGGGGCCCAAATGCTGGTTTATGAATATGTGCCTAATGGTTCTCTGCTCGAGTACATGATGGGAAAAAGAGGGAAGAGCTTAACTTGGAGGCAAAGAGTAAACATGGCAATAGGAGCAGCTAAAGGTATAGCTTACTTGCATGAAGAGGTGAAACCGAGTATAATTCATCGTGATATCAAACCGAGCAACATCTTAATAGGGGAAAGATTTGAGGCTAAAGTTTCAGATTTTGGGTTGATAAAATCAGGACCAACTGGTGATCAATCTCATGTTAGCAGCCAGATCAAAGGAACCCCAGGATACCTTGACCCCACTTATTGTTCAACCTTTCATTTGACTACTTTCAGTGACGTTTATAGTTTTGGTGTCATACTTCTCCAACTTATTTCTACTAGACCAGCCGTTGATCCCACAAAAAATCAAGATAGTTCTCATATTATTGATTGGGCAAGACCTAGCATAGAGAAAGGTAATATTGAAGAAATCATAGATTCCAATTTACTATGTGAGCCTTGCAATATGAAGGTTATGTTGAAGATGGGTCAGCTTGCCCTTAGATGTGGGGCTCAAGTACCAAAGCATCGTCCTACAATGACTCAAGTGTGCCAAGAGTTAGAAGAGGCTCTCCATGCAGCTGATAACTTGATTGGCAAATTACCTTCAAAGAATTTCAGTAAATCAAGTAACACATTTCAAGAATTAATAGCATCAGATGCTCTCATATCCATAGAAAACTCTGATTGTTCAGAGAGTTTTGTAAGCATAAATGGTGTTGGATTTCAAAAGTTTCGTATCGATATGGATAGTTTATCCTTTCAAAGTGAAACTTTAAGATGCCTTGAAAATAATAGTATTAGTATTGACACTGATGTCAACACTTCGAGGAGAATTCAAGAAGACGAAGCTAGGGAAAAGTAG	1410	0.3894	MDDRHRNLLAAPPSEMEKPTNSKSSYCQSMLIGSVCGILFLTVMIVALLYCIFKRKGIPLECRSSKGAEDEKSLKYGKISLRRFDLEELEKATDNFSPDCLLGSGAFGTVYKGTFELEGTLAIKRAHGESFLSKAEFINEVRLISKVKHRNLVSLVGYCEEPGDGAQMLVYEYVPNGSLLEYMMGKRGKSLTWRQRVNMAIGAAKGIAYLHEEVKPSIIHRDIKPSNILIGERFEAKVSDFGLIKSGPTGDQSHVSSQIKGTPGYLDPTYCSTFHLTTFSDVYSFGVILLQLISTRPAVDPTKNQDSSHIIDWARPSIEKGNIEEIIDSNLLCEPCNMKVMLKMGQLALRCGAQVPKHRPTMTQVCQELEEALHAADNLIGKLPSKNFSKSSNTFQELIASDALISIENSDCSESFVSINGVGFQKFRIDMDSLSFQSETLRCLENNSISIDTDVNTSRRIQEDEAREK	469

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju09g2424	469	PANTHER	OS01G0750732 PROTEIN	41	390	-	-
	Alju09g2424	469	MobiDBLite	consensus disorder prediction	1	21	-	-
	Alju09g2424	469	Gene3D	Phosphorylase Kinase; domain 1	66	173	-	-
	Alju09g2424	469	ProSiteProfiles	Protein kinase domain profile.	96	373	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju09g2424	469	SUPERFAMILY	Protein kinase-like (PK-like)	76	370	IPR011009	-
	Alju09g2424	469	CDD	STKc_IRAK	102	371	-	-
	Alju09g2424	469	FunFam	probable LRR receptor-like serine/threonine-protein kinase RKF3	174	376	-	-
	Alju09g2424	469	Gene3D	Transferase(Phosphotransferase) domain 1	174	388	-	-
	Alju09g2424	469	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	218	230	IPR008271	GO:0004672\|GO:0006468
	Alju09g2424	469	ProSitePatterns	Protein kinases ATP-binding region signature.	102	124	IPR017441	GO:0005524
	Alju09g2424	469	SMART	serkin_6	96	373	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju09g2424	469	Pfam	Protein tyrosine and serine/threonine kinase	101	369	IPR001245	GO:0004672\|GO:0006468
	Alju09g2424	469	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	66	173	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju09g2424	Alju-ChrAlju09	47098833	47100847	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju09g2424	82	415	Receptor kinase-like Gene Family	AT1G30570	42.090	1.41e-77	257

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Alju09g2424		PK_Tyr_Ser-Thr	2.3e-42	CL0016