Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2387 ATGCTCGTTCCCTTTATAAATTACCCCCCGATTCCCTATTTTGCCTCCGCCCAAGTCTCGCCTCACAAATACGACATCGCATTGCACCGTAACATGCTCCCTCTTTCTCGCCCTGCCCCTCTTCCCGCCCTTGGTTTCTCCGGCAACTCTGTTTCCTCTTCGCCCCCGGCGTCGCCTCATCGTCTTCCAATCCGGCCGATCGTTGCATCCGCCACCGAGACCGAATCTTGCTCCACTTGGACTGAGCAACCGAAATCGAGGTCCTCCTATCTCAGCTCCCTTACTATGTCTTCGTTGACGTCGCTGTACGAGATTCTAGGGATTCCGGCAGGCGCGTCCCATCAAGAAATTAAGGCGGCCTACCGACGATTGGCGAGGGTGTGCCATCCGGATGTGGCGGCGGTGGATCGGAAGGATTCGTCGGCCGACGAGTTTATGAAGATTCACGCCGCGTACTCCACTCTGTCGGACCCCCAAAAGCGCGCCACCTACGACAGGAGCCTCTTCGTCCGTCGACAGAGGCCTTTGTCCACGGCGTCTTCGTATTCCGGTTACAGTGGCCGGAACTGGGAAACTGACCAGTGTTGGTAG 591 0.5736 MLVPFINYPPIPYFASAQVSPHKYDIALHRNMLPLSRPAPLPALGFSGNSVSSSPPASPHRLPIRPIVASATETESCSTWTEQPKSRSSYLSSLTMSSLTSLYEILGIPAGASHQEIKAAYRRLARVCHPDVAAVDRKDSSADEFMKIHAAYSTLSDPQKRATYDRSLFVRRQRPLSTASSYSGYSGRNWETDQCW 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2387 196 Gene3D DnaJ domain 87 187 IPR036869 -
Alju09g2387 196 SMART dnaj_3 100 160 IPR001623 -
Alju09g2387 196 PRINTS DnaJ domain signature 103 121 IPR001623 -
Alju09g2387 196 PRINTS DnaJ domain signature 140 160 IPR001623 -
Alju09g2387 196 PRINTS DnaJ domain signature 121 136 IPR001623 -
Alju09g2387 196 ProSiteProfiles dnaJ domain profile. 101 168 IPR001623 -
Alju09g2387 196 SUPERFAMILY Chaperone J-domain 95 171 IPR036869 -
Alju09g2387 196 Pfam DnaJ domain 102 165 IPR001623 -
Alju09g2387 196 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 53 192 - -
Alju09g2387 196 ProSitePatterns Nt-dnaJ domain signature. 145 164 IPR018253 -
Alju09g2387 196 CDD DnaJ 103 157 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2387 Alju-ChrAlju09 46851035 46851625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2387 91 165 C2H2 Transcription Factor Family AT1G74250 39.241 2.11e-09 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2387 09 46851035 46851625 Alju09g2387 09 46851035 46851625 ECH