Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2385 ATGGATCAGTGGAAACCTGAAGATTTGTCTAAATCTGCATCTGTTGCAGCCGATTTAGTGCCTTCTTCTCTTCAGCCTCAGTCGCAACTTGTTACCGTCACCTCTAGCTGTTTGCAGAATTCGCATACCGAATCCAGGCAGAGGCCTGAAGCTGAAGCACAGGATCCAGTTGCTGCAAGAAGACTCCAGAAGGCAGACCGTGAGAAACTGAGGAGGGATCGACTAAATGAGCATTTCCTAGAGCTGGGAAACACATTAGATCCAGATAGGCCAAAGAATGACAAGGCCACTATCCTTTCAGACACAATTCAGGTGCTAAAAGATTTAACTGCTGAAGTCAACAGACTAAAAGCTGAGCATGCTGCACTTTCTGAAGAATCACATGAACTAATGCAGGAGAAAAATGAACTCAGAGAAGAGAAGATATCTCTAAAATCTGACATTGAAAATCTTAATGCACAATATCAGCAGAGAGTGAGAGTCACATTCCCATGGACTGCAATCGATCATTCAGTTGTCATGGCTCCACCGTATTCATATCCAGTTCCTATACCCATTCCTTCTGCTCCAATTTCCATTCATCCGTCACTTCAGCCTTTTCCTTTCTTTGGAAACCAAAATCCTTGTTCCACATATGTCCCCTTTTCTGCTCCTGCTAATCCCCCAGTCGAGCAGCCAACTGGCCAATATGCTTCAACGTCCAGTGCTTCAAGCAAACAAGATTCCAGAAGTAGGTTGCCGGATCATGAAAGGACAGGCAATGCTGAAAGATGCGGTGAGTCTAACGATGTAGCCACAGAGCTTGAACTTAAGATGCCTGGATCATCATTGCGGCAGGAATCATCTTCTGGAGCAAGGAAGGGCAAGCATTCATCAAAGAAGGAGAGAAATATCACAGATGGGAGTACTTCAAGCAGGCATTCTTCATCACAAGGACCTCAAGTTAGCTCCAACAGCGTGGGTGACATCCCCAAGTCTGATAAATCATAA 990 0.4495 MDQWKPEDLSKSASVAADLVPSSLQPQSQLVTVTSSCLQNSHTESRQRPEAEAQDPVAARRLQKADREKLRRDRLNEHFLELGNTLDPDRPKNDKATILSDTIQVLKDLTAEVNRLKAEHAALSEESHELMQEKNELREEKISLKSDIENLNAQYQQRVRVTFPWTAIDHSVVMAPPYSYPVPIPIPSAPISIHPSLQPFPFFGNQNPCSTYVPFSAPANPPVEQPTGQYASTSSASSKQDSRSRLPDHERTGNAERCGESNDVATELELKMPGSSLRQESSSGARKGKHSSKKERNITDGSTSSRHSSSQGPQVSSNSVGDIPKSDKS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2385 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 59 130 IPR036638 GO:0046983
Alju09g2385 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 109 IPR011598 GO:0046983
Alju09g2385 329 MobiDBLite consensus disorder prediction 35 70 - -
Alju09g2385 329 MobiDBLite consensus disorder prediction 222 241 - -
Alju09g2385 329 CDD bHLH_AtILR3_like 64 138 - -
Alju09g2385 329 Pfam Helix-loop-helix DNA-binding domain 60 109 IPR011598 GO:0046983
Alju09g2385 329 MobiDBLite consensus disorder prediction 242 257 - -
Alju09g2385 329 MobiDBLite consensus disorder prediction 283 301 - -
Alju09g2385 329 Gene3D - 57 142 IPR036638 GO:0046983
Alju09g2385 329 SMART finulus 65 115 IPR011598 GO:0046983
Alju09g2385 329 MobiDBLite consensus disorder prediction 45 70 - -
Alju09g2385 329 Coils Coil 99 154 - -
Alju09g2385 329 MobiDBLite consensus disorder prediction 302 323 - -
Alju09g2385 329 MobiDBLite consensus disorder prediction 216 329 - -
Alju09g2385 329 PANTHER TRANSCRIPTION FACTOR BHLH121 27 326 IPR044579 GO:0003700|GO:0006879
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2385 Alju-ChrAlju09 46839427 46842531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2385 50 276 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 55.462 2.60e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju09g2385 HLH 7.8e-09 No_clan