Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2380 ATGGAAGCTCAGCAGCAGCAGGAGGAAGGTGGAGGAAATAGAGGAGGGTATATGTGCAGGCAAAGCAGTACAAGGTGGACTCCCACAAGTGACCAGATAAGGATACTGAAGGACCTTTATTACAACAATGGAGTTAGGTCCCCAAATGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGCAAGATTGAAGGCAAGAACGTCTTTTACTGGTTCCAGAACCACAAGGCCCGTGAACGCCAGAAGAAACGCTTCACTACTACTACTTCCTCCTCCTCTGATCTTCATCTCCCCTCCACTCCCATGCATTTCCACAGTAGACCTCCTCCTCCTCCCACTCCTACTACCAACAATATCCCTCCACCTCCTAATAATTGGAAGCCTGATCACGAACCCAATATTCTTCATCCCAAGTATTCTAACATACCACCATCTCACGGCGTTTCTTCTGCTTCTGGGATGGTTGCTCTCGGTCAGATGGGGAACTATGGCTATGGATCTGTCACTATGGAGAAGTGTTTTAGGGACTGCTCGATATCAGCAGGAGGAAGCAGTGGCACCATAAACCACCAGAATTTGGGATGGGTAGGTATGGATCCGTACGCAAACTACAGTAACTTGTTGGACAAAATAAGGCCTGGAGATCAAGAAACCCTGAAAGATGAACAAGAAGGGGAAGATGATGGAGCCCCTGAGATTGAAACCCTCCCTCTGTTTCCCATGCACGGAGAGGACATCCACGGCTACTGCAACCTCAGGTCTGATTCGTCTTCTTACTATGCCGGTGGCTGGTATCACCACGCCGCCGCCGATGAATATGCCTTCAAGAACGTCGTCAATGGCTCTCACCACCGTGCTTCCCTCGAGCTCACTCTCAACTCCTACACCCGCAGATCTCCAGATTCAACTTGA 921 0.4984 MEAQQQQEEGGGNRGGYMCRQSSTRWTPTSDQIRILKDLYYNNGVRSPNAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTTTTSSSSDLHLPSTPMHFHSRPPPPPTPTTNNIPPPPNNWKPDHEPNILHPKYSNIPPSHGVSSASGMVALGQMGNYGYGSVTMEKCFRDCSISAGGSSGTINHQNLGWVGMDPYANYSNLLDKIRPGDQETLKDEQEGEDDGAPEIETLPLFPMHGEDIHGYCNLRSDSSSYYAGGWYHHAAADEYAFKNVVNGSHHRASLELTLNSYTRRSPDST 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2380 306 SUPERFAMILY Homeodomain-like 13 86 IPR009057 -
Alju09g2380 306 Gene3D - 23 89 - -
Alju09g2380 306 Pfam Homeodomain 23 84 IPR001356 GO:0003677
Alju09g2380 306 CDD homeodomain 24 86 IPR001356 GO:0003677
Alju09g2380 306 ProSiteProfiles 'Homeobox' domain profile. 19 85 IPR001356 GO:0003677
Alju09g2380 306 MobiDBLite consensus disorder prediction 1 27 - -
Alju09g2380 306 MobiDBLite consensus disorder prediction 83 138 - -
Alju09g2380 306 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 4 276 IPR044555 GO:0003700|GO:0099402
Alju09g2380 306 SMART HOX_1 21 89 IPR001356 GO:0003677
Alju09g2380 306 MobiDBLite consensus disorder prediction 106 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2380 Alju-ChrAlju09 46801716 46803170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2380 17 248 Wox Gene Family AT2G17950 42.169 1.13e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Alju09g2380 Homeodomain 1.7e-17 CL0123