Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2372 ATGAAGCGGGCAAGGAAATCGAACAGGGTTTCGTGGGCTCCTGGATTTAATCTGTGTCAGGTGAAAATGTTCTTATCTGAGGACTGCCCTTCGAAAGTTAGTCAGACATCTCAAGATCTGCTTCAAGCAAAGACATCATCAATTTTGCATTCAAGCACTAATGAGTCTTATGATTTACCTCCTGGCTTTGAAGGAAATCATTTTTTGAACCATCTAAAGAATGAACTCTCCCACTTACATCAGATTAAATGGAAAGCGCCTCCCCTGTTTGGTCTCAGTCAAAATTGGCTAGTTGCAGCTGGTCAAGAAAGTAGGGAGAAAGTGGATCAAAAACTAAGAGAAATGAAGGTGCTTGAAGCAGTATATCCTCGCCCTTCAGCTATTCCTCCAAGTCCATCTGTTTCCTTAGATGTTGAGGAGGAAGACTATGATGATAACCTCACTCCTCTTATCCCCATCATTCCCATTGAGGAAGAAGAGCTTATGGATGTGAACGCTGAATTGCCAGCAACAACTGACATCTCCAGCGCTCTGCAGACACGAAATTTGCACCAATCCATATCAGCAACAGAGAGACCCATATGTTCACAGCCTAGTAGCTCATCCTCTCTAGCCTCACCTGGGGCATCTGGTTTGGAAGCTGATCTTGCTGCAGCTTCTGCTGTTGTTGCTGCCATTATGAATAGTAATGAGCAAGGCAGCTCAATTGACATGGATTTACTTGTTAGAATACTTAATGATCCATTAATGATTGAGAAGTTGAGAAGTGTTCAAGATGGAGCTGCAGCGACTGCTGTAAGTGCACCCGCAAATACAGTGGGGTTTCCTAGTTCTGGATTCAAGTGCGCTTCTCAATCAGTTTCATCACCTCCACTTAGACCTGATAAGCCAACTTCTGGGGTTAATCCCTCAAGTACTAAGGGTTTATTTCCTGATTCTGGCTTGATGCCAGCTACTACTTCAGTTCAATTGATGCATACACCAGATAAGCCAGCAATTCCGTCACTTCCATTTTCTAGGTCTATGCTAGGGAAACTAGCAACTCCTTCAGCATCATTGCCTCCACACACAACTACTGCTGATATTTACAAGCCTGGGCACAAAACCACTGACCATTTGTCAAGTGGTAGTCTGCCTTCTGTAAGTACCCAACGTCCTCAACAAGATACTGTCAAGCTAGCAGCACCCATGGCTTCCATTTCATCCAGGGAACCTAGCATGGTGCCATTACCTTCAACGGGTGTGAGCATGCCTTCAGTAGTAAACCAGGTGCGACCCCCTGCAACTACAATGGCTTACCTACCTAGCACAGGCTCAGCATTTACTGGGAAGGAAGTTCATCCTGTTAAGGATCTTAGCTATTATAAGAACCTTATTAGGCAACATGGTGCTGATGCTAATAACACTAGGCAAGAGACGCATGACGCCCTAATCCGTCAAACTAATTTCAAAGATTTGAAACCGGTTCATAACAATAAACCAGAAGTGAATTTCAAAACCCAGAAACCATGCATATACTTCAAAAGTTCTAGGGGTTGTCGAAATGGTCCCAATTGCCCTTATCAACATGCTATGTCAGATCAGTGGGGGTCTGTTAACATCCTAGGGCCCCGCAGTGCAAAAAGAGCTAAATTAGGACCAGAAATCAGGGGTAGAACATTAATATAG 1668 0.44 MKRARKSNRVSWAPGFNLCQVKMFLSEDCPSKVSQTSQDLLQAKTSSILHSSTNESYDLPPGFEGNHFLNHLKNELSHLHQIKWKAPPLFGLSQNWLVAAGQESREKVDQKLREMKVLEAVYPRPSAIPPSPSVSLDVEEEDYDDNLTPLIPIIPIEEEELMDVNAELPATTDISSALQTRNLHQSISATERPICSQPSSSSSLASPGASGLEADLAAASAVVAAIMNSNEQGSSIDMDLLVRILNDPLMIEKLRSVQDGAAATAVSAPANTVGFPSSGFKCASQSVSSPPLRPDKPTSGVNPSSTKGLFPDSGLMPATTSVQLMHTPDKPAIPSLPFSRSMLGKLATPSASLPPHTTTADIYKPGHKTTDHLSSGSLPSVSTQRPQQDTVKLAAPMASISSREPSMVPLPSTGVSMPSVVNQVRPPATTMAYLPSTGSAFTGKEVHPVKDLSYYKNLIRQHGADANNTRQETHDALIRQTNFKDLKPVHNNKPEVNFKTQKPCIYFKSSRGCRNGPNCPYQHAMSDQWGSVNILGPRSAKRAKLGPEIRGRTLI 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2372 555 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 546 - -
Alju09g2372 555 MobiDBLite consensus disorder prediction 370 387 - -
Alju09g2372 555 ProSiteProfiles Zinc finger C3H1-type profile. 498 526 IPR000571 GO:0046872
Alju09g2372 555 MobiDBLite consensus disorder prediction 189 209 - -
Alju09g2372 555 MobiDBLite consensus disorder prediction 283 309 - -
Alju09g2372 555 MobiDBLite consensus disorder prediction 189 208 - -
Alju09g2372 555 MobiDBLite consensus disorder prediction 283 314 - -
Alju09g2372 555 MobiDBLite consensus disorder prediction 366 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2372 Alju-ChrAlju09 46730306 46734152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2372 81 152 Homeobox Transcription Factor Family AT4G02560 43.056 6.22e-06 47.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Alju09g2372 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2372 09 46730306 46734152 Alju09g2372 09 46730306 46734152 ECH