Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2365 ATGATGGAAACGATGGAGTCATGTGTCCCACCGGGCTTTCGGTTCCACCCAACAGATGAAGAGCTCGTTGGTTACTATCTCAGGAAGAAAGTCGCTTCTCAGAAGATAGATCTTGACGTCATCAGAGAGATCGATCTATATCGCATTGAACCATGGGATCTCCAAGAAAGATGCAGGATCGGGTATGAGGAACAGAGCGAATGGTATTTCTTCAGCCACAAAGATAAGAAGTATCCGACGGGGACGAGGACCAACAGAGCCACCGTGGCTGGGTTCTGGAAGGCGACAGGAAGAGACAAGGCAGTGTACGACAAGACAAAGCTCATAGGAATGAGGAAGACCCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGCCAGAAAACTGACTGGATCATGCATGAGTATAGACTTGAATCTGATGAAAATGCACCCCCTCAGGAAGAAGGATGGGTTGTATGTAGAGCATTCAAGAAAAAGAGCAATGGCCAAACAAAGACAATAGGAGGATGGGATTCAGGTTACTTTTATGAGGAGACTAGTGGAATGGACTACGTATCAAGGCAGGCTCATCATCAAAGTTTCATAGCTCCAAGTTTTTTGTGTAAGAAGGAGATAGAAGCAGAAAATAATAACAACTTGATCTTCATGCACTCATCATCAGATCAGTTCGTACAGCTTCCTCAGCTAGAAAGTCCATCTCTGCCATTAATAAAGAGGCCAAGCTCAGCGCCACTAGCGTCTTTAATATCACACAATAATAATAACAAGAACGTATTAGGAGAAGATGACCAAAACAACAGGCTGTTCAACAACAACAACGACACCAACACCAAAAGGGTGACTACTGATTGGAGGGCTCTTGACAAATTTGTGGCATCTCAATTGAGTCAAGAAGAAGAGAGGCACGATGAGAGTAGTGATAATCATGGAGTGTCAGGCTTTGAAACGCACGAGGCATTGCTGATATTGCAGAGTGGTAGCGATGAAGCAGGCAACAAGTTCATGAGCCCATTTTTAAATGGAAGCTCTTCTGACTGTGACATTGGGATATGCGTGTTTGATAAATGA 1068 0.441 MMETMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQSEWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKAVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENAPPQEEGWVVCRAFKKKSNGQTKTIGGWDSGYFYEETSGMDYVSRQAHHQSFIAPSFLCKKEIEAENNNNLIFMHSSSDQFVQLPQLESPSLPLIKRPSSAPLASLISHNNNNKNVLGEDDQNNRLFNNNNDTNTKRVTTDWRALDKFVASQLSQEEERHDESSDNHGVSGFETHEALLILQSGSDEAGNKFMSPFLNGSSSDCDIGICVFDK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2365 355 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Alju09g2365 355 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Alju09g2365 355 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 265 - -
Alju09g2365 355 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Alju09g2365 355 FunFam NAC domain-containing protein 18 162 - -
Alju09g2365 355 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2365 Alju-ChrAlju09 46674455 46676731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2365 2 354 NAC Transcription Factor Family AT2G18060 60.916 4.96e-155 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju09g2365 NAM 3.7e-38 No_clan