Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2364 ATGCACACCTTCCAAACCCTCACCACTGCGTCTGCCTGCAAGTCTGCAACACATTCTGAAATTCGTGTCTTCGAACTATCGCTGTCGTTGGTGGTCATGCCTCCTCTTCTCTTTCTGCTGGTTCTCTGCGCACCGTTCCTAACGTGCGCCGAGCGGAGCAGCGTCACCATTGCTGAGATCGGAGCCCTCACGTCCTTCAGACTCAACCTTCAGGATCCTCTCAGCGCTCTCGATGGCTGGGATCCTTCCTCGCCGGCCGCTCCTTGCGACTGGCGCGGAGTTGCTTGTTACAATAACAGGGTCACCGAGTTGCGCTTGCCTCGGCTTCAGCTCAGTGGCCGGCTCACTGACCGTCTTTCTGACCTGCGCATGTTGCGGAAGCTGAGCCTTCGCTCTAACTCCTTCAACGGGACCATTCCTTCGTCGCTTGGTAAATGTGGCTTCCTGCGCGCCGTGTTTCTGCAGTACAACTCACTCTCCGGCACTCTTCCGCCGGAGATCCGAAACCTCACCGGCCTTCAGATTCTTAATGTCGCCCAGAACCATCTCTCCGGCAGAATCCCCGGCGACCTCCCGTTGAGCCTGAAGTACGTCGACCTCTCGTCGAACTCCTTTTCTGGCGAGATTCCGAGTGCCTTTGCCAACCTTTCTCAGCTTCAGCTAATCAACCTGTCTTACAACCAGTTCTCGGGGGAGATTCCGGCGGGCTTTGGACAGCTTCAGCAGCTCGAATACCTCTGGCTTGATCACAATCTTCTCGGAGGAACTCTGCCTTCGGCGCTCGCTAACTGCTCTTCCCTCGTGCATCTGAGCGTAGAAGGAAATGCACTTGGAGGAGTGATCCCGGCGGCCATTGCAGCTCTTCCGAGGCTTCAGGTGATATCTCTCTCTCATAATAATCTTACCGGATCGATCCCGGCTTCCATTTTCTGCAACATTTCGGTCTACACGCCGTCGCTTCGAATTGTTCAGTTAGGATTTAATGGTTTCACGGATATTGTCGAGCCTCAGGCATCAACGTGTTTCAGTGTTCTTCAGGTTTTGGATATTCAGCGTAACAACATACATGGCACGTTTCCCTTGTGGATAACGAATATGTCCACGTTAACAATGCTTGATGTTTCGAGTAATGCATTTTCTGGCGAGATTCCATCAGAAATTGGAAGCCTGGCGAAATTGGAGGAGTTAAGGATGGCCAACAATTCATTTACTGGGATAATTCCGGAGGAAATCAAGAAATGTGCCTTCTTGCGTGTTATTGATTTTGAAGGCAACCGGTTTACCGGAGAAGTCCCTTCGTTTTTTGGTTACATGTCAGGCCTGAAGATCTTGTCCCTTGGTGGGAATCTTTTCTCTGGTCCTGTCCCGGAGAGTTTTGGTAACCTTTCGGCGCTGGAAACCCTGAGTTTGAGAGGTAATAACCTGAATGGAACCATGCCTGAGGAAGTCATGGGATTGAGCAATATTTCAAGTCTTGATCTTAGCGGAAACAAGTTTACCGGTAAAATGTCTTCAAGTATTGGGAACCTGACTCGATTAATGGTTCTCAATCTGAGTGGCAACGGCTTTTCTGGAAAAGTCCCTGCTAGTTTGGGGAATCTTTTCAGGCTAACTACACTAGACTTGAGCAAACAAAATCTTTCAGGGGAGTTACCATTTGAACTCTCAGGTTTGCCGAATCTGCAAGTTATTGCATTGCAGGAGAACCGATTATCTGGGGACGTTCCTGAAGGGTTTAGCAGTTTGATGAGTCTGCGATATGTGAACCTGAGCTCTAACGCGTTTTCGGGACACATTCCTCAAAATTATGGCTTTCTCCGATCACTGGTTGCTCTTTCTTTGTCTGGCAATCACATTACAGGAATAATTCCTCCAGAGATCGGAAACTGCTCTGACATTGAGATTCTTGAGCTTGGCTCAAATTCTTTGACAGGTCACATTCCCACTGATTTCACTCGACTCGCCCAATTGAGAGAGCTTGATTTGAGCAGAAACAGTTTAACTGGAGATATACCCGGCGACATCTCCAAATGTTCGTCCTTAAATGCTCTGCTGCTGGAACACAACCATCTTTCAGGCACTATACCTGAGTCACTGTCTGAGCTATCAAACCTGACAATGCTAGGTCTCTCTGCTAACAACTTGAGTGGGGAAATATCAAGTAATATTTCCAGGATGCCTAATTTAGTGTCCTTCAATGTCTCGCGAAATAACCTGGAAGGTGAGATACCGCCAACCTTGGGTGCTCGGTTCAACAATGCCTCTGCATTTGCGGATAACCAGAACTTATGTGGGAAGCCACTGGATAGGAAGTGTGAAAATGTGGTTGATAGGGGCAAGAAGAGGTTGATTGTGTTGATTGTTGTAATTGCTGCCGGAGCTTGCTTACTATCATTGTGTTGCTGCTTCTACATATACAGCCTTCTCCGGTGGCGTAAAAGGCTCAAGGAAGGGGCGTCTGGGGAGAAAAAAAGGAGTCCTGCTAGGGCAAGTTCTGGAGCAAGTGGAGGTCGAGGCAGCACTGATAATGGTGGACCAAAACTGGTCATGTTTAATACCAAAATCACACTTGCTGAAACCATTGAAGCAACTAGACAGTTTGACGAAGAGAATGTGCTGAGCAGAACAAGGTATGGATTGGTATTCAAGGCCTGCTACAACGACGGAATGGTGCTTTCAATTCGCAGACTCCAAGATGGATCTCTGGACGAAAATATGTTCAGGAAAGAAGCTGAATCACTAGGGAAAGTGAAGCACCGAAACTTAACCGTTCTCAGAGGTTACTACGCCGGACCACCTGACATGAGGCTGCTGGTCTACGATTACATGCCTAATGGAAACCTTGCAACCCTCCTCCAAGAAGCTTCTCATCAAGATGGCCATGTTCTGAATTGGCCAATGCGTCACCTCATTGCACTTGGAATTGCTCGTGGCTTAGCTTTCCTGCACCAGTCCTCAATGGTTCACGGGGACGTGAAACCACAAAGTGTCCTGTTCGATGCTGATTTCGAAGCTCATTTGTCAGATTTTGGGCTCGACCGTCTTACAGTAGCCACCCCCGGCGAACCCTCCACCTCAACCTCAGTTGGCACACTGGGATACGTATCACCTGAAGCTGTATTAACAGGGGAAGCCACGAAAGAGTCTGATGTGTACAGCTTTGGCATAGTGTTGCTGGAGCTTCTTACAGGGAAACGACCGGTGATGTTCACACAGGACGAAGATATAGTAAAATGGGTAAAGAAACAACTACAAAGGGGTCAAATCACAGAGTTGTTGGAGCCTGGATTGCTTGAGCTGGATCCAGAATCATCTGAATGGGAAGAGTTCCTGCTCGGTGTGAAAGTGGGCTTGCTCTGCACAGCACCGGACCCTCTCGATCGACCAACCATGTCTGACATTGTGTTCATGCTTGAAGGCTGCCGCGTCGGACCCGACATCCCGTCCTCCGCTGATCCCACCTCTCAACCTTCGCCGGCGTGA 3483 0.491 MHTFQTLTTASACKSATHSEIRVFELSLSLVVMPPLLFLLVLCAPFLTCAERSSVTIAEIGALTSFRLNLQDPLSALDGWDPSSPAAPCDWRGVACYNNRVTELRLPRLQLSGRLTDRLSDLRMLRKLSLRSNSFNGTIPSSLGKCGFLRAVFLQYNSLSGTLPPEIRNLTGLQILNVAQNHLSGRIPGDLPLSLKYVDLSSNSFSGEIPSAFANLSQLQLINLSYNQFSGEIPAGFGQLQQLEYLWLDHNLLGGTLPSALANCSSLVHLSVEGNALGGVIPAAIAALPRLQVISLSHNNLTGSIPASIFCNISVYTPSLRIVQLGFNGFTDIVEPQASTCFSVLQVLDIQRNNIHGTFPLWITNMSTLTMLDVSSNAFSGEIPSEIGSLAKLEELRMANNSFTGIIPEEIKKCAFLRVIDFEGNRFTGEVPSFFGYMSGLKILSLGGNLFSGPVPESFGNLSALETLSLRGNNLNGTMPEEVMGLSNISSLDLSGNKFTGKMSSSIGNLTRLMVLNLSGNGFSGKVPASLGNLFRLTTLDLSKQNLSGELPFELSGLPNLQVIALQENRLSGDVPEGFSSLMSLRYVNLSSNAFSGHIPQNYGFLRSLVALSLSGNHITGIIPPEIGNCSDIEILELGSNSLTGHIPTDFTRLAQLRELDLSRNSLTGDIPGDISKCSSLNALLLEHNHLSGTIPESLSELSNLTMLGLSANNLSGEISSNISRMPNLVSFNVSRNNLEGEIPPTLGARFNNASAFADNQNLCGKPLDRKCENVVDRGKKRLIVLIVVIAAGACLLSLCCCFYIYSLLRWRKRLKEGASGEKKRSPARASSGASGGRGSTDNGGPKLVMFNTKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLQDGSLDENMFRKEAESLGKVKHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHQSSMVHGDVKPQSVLFDADFEAHLSDFGLDRLTVATPGEPSTSTSVGTLGYVSPEAVLTGEATKESDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2364 1160 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 379 1138 - -
Alju09g2364 1160 Gene3D Ribonuclease Inhibitor 484 775 IPR032675 -
Alju09g2364 1160 Pfam Leucine rich repeat N-terminal domain 60 96 IPR013210 -
Alju09g2364 1160 FunFam Nuclear pore complex protein NUP107 56 192 - -
Alju09g2364 1160 FunFam Putative LRR receptor-like serine/threonine-protein kinase 830 942 - -
Alju09g2364 1160 SUPERFAMILY Protein kinase-like (PK-like) 847 1148 IPR011009 -
Alju09g2364 1160 Gene3D Ribonuclease Inhibitor 192 279 IPR032675 -
Alju09g2364 1160 SUPERFAMILY L domain-like 355 747 - -
Alju09g2364 1160 MobiDBLite consensus disorder prediction 820 847 - -
Alju09g2364 1160 Gene3D Transferase(Phosphotransferase) domain 1 943 1146 - -
Alju09g2364 1160 Pfam Leucine rich repeat 345 402 IPR001611 GO:0005515
Alju09g2364 1160 Pfam Leucine rich repeat 440 499 IPR001611 GO:0005515
Alju09g2364 1160 Pfam Leucine rich repeat 607 667 IPR001611 GO:0005515
Alju09g2364 1160 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
Alju09g2364 1160 Gene3D Ribonuclease Inhibitor 58 191 IPR032675 -
Alju09g2364 1160 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 943 1146 - -
Alju09g2364 1160 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 651 772 - -
Alju09g2364 1160 Gene3D Ribonuclease Inhibitor 383 483 IPR032675 -
Alju09g2364 1160 Gene3D Ribonuclease Inhibitor 280 382 IPR032675 -
Alju09g2364 1160 SMART LRR_typ_2 558 581 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 654 678 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 216 239 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 122 146 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 240 264 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 170 194 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 510 534 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 726 750 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 438 461 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 606 630 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 390 413 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 462 486 IPR003591 -
Alju09g2364 1160 SMART LRR_typ_2 288 312 IPR003591 -
Alju09g2364 1160 FunFam Inactive leucine-rich repeat receptor-like protein kinase 193 283 - -
Alju09g2364 1160 FunFam Uncharacterized protein 288 504 - -
Alju09g2364 1160 FunFam LRR receptor-like serine/threonine-protein kinase 585 650 - -
Alju09g2364 1160 Gene3D Phosphorylase Kinase; domain 1 843 942 - -
Alju09g2364 1160 SUPERFAMILY L domain-like 62 334 - -
Alju09g2364 1160 FunFam Uncharacterized protein 506 584 - -
Alju09g2364 1160 SMART LRR_sd22_2 288 315 - -
Alju09g2364 1160 SMART LRR_sd22_2 240 266 - -
Alju09g2364 1160 SMART LRR_sd22_2 654 683 - -
Alju09g2364 1160 SMART LRR_sd22_2 702 725 - -
Alju09g2364 1160 SMART LRR_sd22_2 486 512 - -
Alju09g2364 1160 SMART LRR_sd22_2 438 464 - -
Alju09g2364 1160 ProSiteProfiles Protein kinase domain profile. 867 1147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2364 1160 Pfam Protein kinase domain 877 1134 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2364 Alju-ChrAlju09 46646034 46649688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2364 36 1160 Receptor kinase-like Gene Family AT4G36180 70.185 0.0 1531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Alju09g2364 Pkinase 2.7e-33 CL0016