Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2332 ATGGAGTATAGGGATTTCCACCTTCAGCATCAGCTCCAAGAAGAATATGCTCGCTACTATAAACCTTCCTTTACTTGTGAAGCATGGAACTCCAGCAATTTTTGTCAAAGCACTGAAATAAATCCAAGAGATAAAGGGGAAGAATATGATTTGGATCCTCAACGTTCATGTGGTGATGATATGCTTATAAAAGACGACGTGCCTGATAATTATTTACCCCGGCTGAGTGAAATGATTAGCAGCCACCTCTGTAGTTCTTGTGTGAACGATTCACTAGTCTCATCAATTAGTGAACATTCTCACGTAACTGGGAAAGAGATTTGGCCTGCAGAGATAGCCCCAGCCAATAAGACGACGTCGTACAACACCTTAGCTGCTACATCTTCGTCAAGCTCCAATTTATCAGCCCTAGAGATGCCTCCTTCTTTATTACTGTCATGCTCTCTGGGCTTAAGTTCTCTGATGTTGCTGGGCGGCAATTCTTGTGGTGATGGCCTTCATCTTTCCTGCAATTCTTTTGGTCTTCATGACATGCAACAGCAAGAAAATAGTCCATCCAACAGCTCAAATAAAATTTCAGGATTTATAAGTGGGAGCGGAGTTGCAAGGGCAAAAACGTCACGTAATCGGTCTCAAGAGAAGGAACATGAAGCAAGAGCAAAGAAGTCGAGGACTTCAAGCCCTACCCTGAAGGTCAGAAAGGAAAAACTGGGAGATAGGATTCAGACCCTTCAGAGGTTAGTGGCACCTTTTGGCAAGACCAATACTGCCTCCGTATTGAATGAAACTATAGGCTACATTCACTTCCTTCATGACCAAATTCAGACTTTGAGCATCCCTTATATGAAGAAGTCGTGGAAAACCAAGCCCTTTGGAACGGTGCTGTTGTCCCAGCATTCTAGAGAGGAAACCAGTAGAGAATCGAAGCCAGACCTTAGAAGCAAAGGCCTCTGCCTCGTGCCCCTTTCTTGCGCTTCATATGTTTACAATTTGGACTAG 999 0.4384 MEYRDFHLQHQLQEEYARYYKPSFTCEAWNSSNFCQSTEINPRDKGEEYDLDPQRSCGDDMLIKDDVPDNYLPRLSEMISSHLCSSCVNDSLVSSISEHSHVTGKEIWPAEIAPANKTTSYNTLAATSSSSSNLSALEMPPSLLLSCSLGLSSLMLLGGNSCGDGLHLSCNSFGLHDMQQQENSPSNSSNKISGFISGSGVARAKTSRNRSQEKEHEARAKKSRTSSPTLKVRKEKLGDRIQTLQRLVAPFGKTNTASVLNETIGYIHFLHDQIQTLSIPYMKKSWKTKPFGTVLLSQHSREETSRESKPDLRSKGLCLVPLSCASYVYNLD 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2332 332 Gene3D - 216 289 IPR036638 GO:0046983
Alju09g2332 332 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 86 326 - -
Alju09g2332 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 221 270 IPR011598 GO:0046983
Alju09g2332 332 MobiDBLite consensus disorder prediction 207 229 - -
Alju09g2332 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 231 287 IPR036638 GO:0046983
Alju09g2332 332 MobiDBLite consensus disorder prediction 198 229 - -
Alju09g2332 332 CDD bHLH_AtbHLH_like 227 278 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2332 Alju-ChrAlju09 46346487 46348762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2332 176 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 47.368 5.35e-35 130