Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2287 ATGATTTTGGTTGACGAAGAGCTAATTAGAGTTGGAGTGAGTGCTACACACAAGAATTCAATTGAGCGCTTTGCAGATGAACCTAAGGAAGGAAATGTATACAATTTCCAAAATTTTGAAGTTGTTGAGAATAATGACAAATACAGAGTTACCACACATCCTTGGACGTTCATTTTTCATCCGAACACTTACATAGACGATTCAGATATCAGTATACCTGATCCAGCATATTTGATTGTGCCTATTACAGAAATACAACAAGGAAATGTTAGAGATGATGAGCTTATTGGTTTAAGGGAAAATGATGTTATTAAGAAGCTGAACTTTAGCATCTCTGACCAAAGTGAGAATATTATCAACATTTCATTGTGGGGGAACTGCGCTGAAGAAACCTATAGAAAAAAACATGAAGATATGGAGCCACCAATCACTGTACTAATAAGATTTGCCAGGGTCAATAAGAATATTGAGTACGGTCATTTGAGCAATGCGTTTAATGCAACGCTGGTAACATTCAATCCAGATATCCCAGAGGTTAACTTGATGAAGGAAAGGCTCAGTCAAGACTCCTCAAGCAGTCAGCTATTTAGCCAAATTAGCAATGCAGATTATCCTACTTACTCTAGCGAGTCTCTCCTGTCGTTCCACACAAGGATATCAGTTGCAGAGATTGGCAAGACTGACAACGAGAGTGATGTGGTGACTCGGGTAACATTACAGAAAGTTGAAACTCTATATGGTTGGGTGTATGATGCTTGTCCATGCGACAAGAAACCCGAATATCAGCCAAACGGTTCCCTCAAATGCAACAAGTGTGACAAAGATGTCCTCATGACTATTCCTAAGTATAAGCTACACTTCAAGGTTTTCGATCACTTTAGGAAATGCTCTATCATCTTCTTTGACCGACATGCAACTGAGTTGTTAGGTAAATCTGCCTCCAAGCTAAAGGAGGACATGCAAATGGAGTCTTTTGATTCAAGGCAGACAGTGAACAATGTCATTCAAGTTGATGAAAATGATGATGAAGACCCGACGTTATCACAACTAATAACCCCTCCCGATTCCAGTATAAAAAGGAAAAAACTTAGTAGAGTTGTTGATGTTGATCTTGGTGATGTTGGCCTTTCTGTATTTTCAACTCCGAAGAACAGTTCCACAAAGCCTTTGAAAAACATTAAGAAGGAGAAGTGA 1194 0.3894 MILVDEELIRVGVSATHKNSIERFADEPKEGNVYNFQNFEVVENNDKYRVTTHPWTFIFHPNTYIDDSDISIPDPAYLIVPITEIQQGNVRDDELIGLRENDVIKKLNFSISDQSENIINISLWGNCAEETYRKKHEDMEPPITVLIRFARVNKNIEYGHLSNAFNATLVTFNPDIPEVNLMKERLSQDSSSSQLFSQISNADYPTYSSESLLSFHTRISVAEIGKTDNESDVVTRVTLQKVETLYGWVYDACPCDKKPEYQPNGSLKCNKCDKDVLMTIPKYKLHFKVFDHFRKCSIIFFDRHATELLGKSASKLKEDMQMESFDSRQTVNNVIQVDENDDEDPTLSQLITPPDSSIKRKKLSRVVDVDLGDVGLSVFSTPKNSSTKPLKNIKKEK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2287 397 Pfam Domain of unknown function DUF223 1 90 IPR003871 -
Alju09g2287 397 CDD RPA1_DBD_B_like 105 186 - -
Alju09g2287 397 SUPERFAMILY Nucleic acid-binding proteins 218 338 IPR012340 -
Alju09g2287 397 Gene3D - 72 198 IPR012340 -
Alju09g2287 397 SUPERFAMILY Nucleic acid-binding proteins 99 190 IPR012340 -
Alju09g2287 397 Pfam Replication factor-A C terminal domain 248 333 IPR013955 -
Alju09g2287 397 Gene3D - 206 346 IPR012340 -
Alju09g2287 397 Gene3D - 1 69 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2287 Alju-ChrAlju09 46024080 46026367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2287 21 316 Core DNA Replication Machinery Family AT2G06510 20.625 5.90e-11 62.4