Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2264 ATGTCACAAGCAGTCGGAACAGTGATTGGCATCGGAGCACTTGTTGTTATTGCTATCGCATTCTATGTAATTTACACTACAAAGAAGGAAAGAGAGAAGGCTCCTAATCACGAAGATCCTCCTCTTGCACAACAAGGTGGTCGGAATTACAACAATGCACAGGAATCTGAGAGACAAAGCCAATTAAGTCAGGGACAAGGGTACGATGAATTGAGAGTGGTGAAAGAGGTGAGCGAGGGCACATTCTTGTACGATGAGCTGGCATTAGCGACAAATGGATTTGTGAGAGGGAATTTGATAGGAGAAGGAGGACTTGGTTACGTGCATAAAGGTGTTTTACCAAATGGAAAGGCTATTGCAGTTAAAACCTTGAAGGAAGGAGGTCCACTTGGAGTTGAGGCCTTCAAATCTGAGAGCGACGACATCGCACGTGTTCATCATCGACACCTCGTATTGCTCCTCGGATTTTGTATTTATCGTGGAAAAAGAATGCTTGTCTATGAATTTGTTCCTAATTTCAATCTGGGACATCATCTTCATGGAAAAGGTGTGCCTCCCATGAGTTGGTCTCGCAGGATGCAGATTGCTATAGGAATTGCCAAAGGCCTTACCTACCTTCATGAAGATTGTGATCCTCCAATTGTCCATCGCAATATCAAAGCCGCCAATATCCTGATTGACGAAAGCTTTGAAGCCAAGGTGGCAGATTTTGGTTTGTCTAAGGTGATATCTGATAATAACACTCACGTTTCAACTCGTGTTATGGGGACACTGGGGTACTTAGCTCCAGAATATGCATCTAGTGGAAAATTAACAGAGAAATCTGATATCTTCTCATTTGGGGTAATGTTATTAGAACTTTTGACTGGGAAGCGGCCCATGGATCTCTCACATGCCTTGGATGATACCTTGGTGGATTTGGCCCGACCATTACTTAATCGAGGGTTAGAAAATGGAAACTTCAGAGAGTTAGTGGACGCATTTTTAGAAGGACGCTATGATAACCAAGAAGTTGCTCGCATGGCTGCTTGCGCTGCAGCCAGCATTCGTCATTCTCCCAAAAAACGTCCAACTATGAGACAGATTCTACTGGCATTGGAAGGAAATGCTTCATCGGAGGATTTGATTGATGCGGGTATACCCCTTCACAATTTTAATTAG 1161 0.4358 MSQAVGTVIGIGALVVIAIAFYVIYTTKKEREKAPNHEDPPLAQQGGRNYNNAQESERQSQLSQGQGYDELRVVKEVSEGTFLYDELALATNGFVRGNLIGEGGLGYVHKGVLPNGKAIAVKTLKEGGPLGVEAFKSESDDIARVHHRHLVLLLGFCIYRGKRMLVYEFVPNFNLGHHLHGKGVPPMSWSRRMQIAIGIAKGLTYLHEDCDPPIVHRNIKAANILIDESFEAKVADFGLSKVISDNNTHVSTRVMGTLGYLAPEYASSGKLTEKSDIFSFGVMLLELLTGKRPMDLSHALDDTLVDLARPLLNRGLENGNFRELVDAFLEGRYDNQEVARMAACAAASIRHSPKKRPTMRQILLALEGNASSEDLIDAGIPLHNFN 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2264 386 MobiDBLite consensus disorder prediction 45 66 - -
Alju09g2264 386 CDD STKc_IRAK 100 368 - -
Alju09g2264 386 SUPERFAMILY Protein kinase-like (PK-like) 79 366 IPR011009 -
Alju09g2264 386 Gene3D Transferase(Phosphotransferase) domain 1 170 378 - -
Alju09g2264 386 FunFam Proline-rich receptor-like protein kinase PERK4 170 376 - -
Alju09g2264 386 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 69 169 - -
Alju09g2264 386 Pfam Protein tyrosine and serine/threonine kinase 97 363 IPR001245 GO:0004672|GO:0006468
Alju09g2264 386 ProSiteProfiles Protein kinase domain profile. 94 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2264 386 MobiDBLite consensus disorder prediction 30 66 - -
Alju09g2264 386 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 13 375 IPR047117 -
Alju09g2264 386 Gene3D Phosphorylase Kinase; domain 1 53 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2264 Alju-ChrAlju09 45872481 45874742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2264 43 375 Trihelix Transcription Factor Family AT1G70460 52.695 1.75e-116 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju09g2264 PK_Tyr_Ser-Thr 1e-42 CL0016