Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2200 ATGCGAGTTATTTTTTCATCTGCCGCAGCCATTCATTTCAACCATTGCAAAAGCTTGAAGTTCAATTTTCATCCAACAATGTTTCTGTACCAGAAAAGCTTCTCTATTCTTCTTATACTCTTCATGATTTACTCCACAAAAGCCGAAAACAAAAGCACATGCCAGACAAAGTGTGGAGAAAATTCATTGCCGTATCCTTTTGGGTTCTCTGAAGGTTGCCAAATCCAATTAAACTGTAACCTCACCAATAACCAAATGCAAATTGGGGAGTTTTTGATTCAGAACGTAACATCTAGCAGCATATTTATCCATATTCCTGCAAAATGCAACCGTACCTTGCAATCCATTGAGCCCCTTTTCACTTCCAAGTTTGCTCCTACAGAGAACAACAGTCTCCTTGTGCAAAATTGTACATCTGCGCTTGGTGGCTGTGTTATACCCACCTCAAGCTTTACGAGCAATCGGATGAAGTTGGATGGCTGCGATAATAGAAGTGATAATATAAGTTGCTTAACGCGAAGCCAAGGCCAGGAAGCTTTTGATGTTATGAAATTCGAGAATGTGATCAGTAGTGGTTGCAAATACTTGTTCTCGTCTTTGGCTATTGACCAGAGGAAAGATGACCCAGGGGCTTCGCTCCAGTTTCAGATATTAGAGCTGGGATGGTGGCTTGAAGGCCCATGCCAATGCTCTCCTAATGCCACCTGTACAAATGTTACTGTCGCCGCCGGAAAGTTCGGGTTCCGGTGTCAATGTCCTCGAGGTTATCACGGAGATGGGTTCTTGAATGGCACCGGTTGCCGGAGATCAGTTTCTAAGTGCAACGCTTCGACACTAACCTCTGGAGGATGTGGAGGAGAAGCTAAAGTCGGGTTTCTCGTTGGAGGGATCATTGCTGGAGTTTTGATAGTGGCAATTCTGTGTCTCCTTGGTTATTATGTACGACGTCGTTCCTATTGTTTGAAGAAGCAACTGACTGTAAAGCGCCTATTGCGTGAAGCTGCAGGCAACTCTAGCGTTCCTTTCTATCCTTACAAAGAAATAGAGAGAGCCACTAATTTTTTCTCAGAGAAACAGAGGCTTGGAACTGGGGCTTTTGGTACAGTTTATTCAGGTAAAATCCATAATGACGATTTGGTTGCCATAAAGAAAATAAGACAGAGAGACCCCAATAGTGTTGACCAAGTCATGAATGAAATCAAGCTCCTTTCTTCTGTGAGTCACCCAAATTTAGTTCGTCTTCTGGGTTGCTGCGTTGAAGAGGATGAACAAATACTTGTTTATGAGTTTATGCCCAACGGACCTTTGTCTCAGCATTTACAGAGAGAGAATGGTAAAGGGCTTCCATGGACTATTCGGCTCACTATCGCATCTGAAACTGCGAATGCCATAGCTTATCTACATTCTGCCATTGATCCTCCAATCTATCACAGAGACATAAAATCCAGCAATATTTTGCTGGATTACAACTTCAACTCAAAAGTCGCAGACTTTGGGCTTTCAAGGCTTGGCATGACCGAAATATCACACATCTCAACCGCCCCACAAGGGACACCAGGCTACGTGGATCCTCAGTATCACCAAAACTACCATCTTTCTGATAAAAGTGATGTTTACAGTTTCGGGGTTGTTTTAATAGAGATAATAACAGCCCTCAAAGTGGTTGATTTTGGTCGACCTCATAATGAGGTTAATTTGGCAGCACTCGCAGTTGATAGAATCAGGAGGGGCTGTGTTGACGAGATCATAGATCCCTTCTTAGAGCCACACAGAGATGCTTGGACACTCTATTCTATTCACAAAGTGGCTGAACTTGCATTCAGATGCTTAGCTTTTCATAGCGACATGAGGCCTACTATGATGGAAGTGGCAGAAGAGCTAGACCACATCAAACGCAGTGGATGGGCAATAATGGAAGAAACCATAGCATCATCGGTCGGGTCGGCACGTTCAACATTACCAAATGAAGCTGAGAAATCCTTTGATGTTCAACTTGATAAAGAACAAGTAGAGAGTGAGAGATTGATTGTTTCAGAGAGGGCAGAGTTGAGGGATAGCTCCCCTGTATCAGTGCATGATACTTGGTCAAGTGGACATAGCTCGCCTTCAAGCAATAGCTTATTGGGAAATGCACCTCAATGA 2142 0.4337 MRVIFSSAAAIHFNHCKSLKFNFHPTMFLYQKSFSILLILFMIYSTKAENKSTCQTKCGENSLPYPFGFSEGCQIQLNCNLTNNQMQIGEFLIQNVTSSSIFIHIPAKCNRTLQSIEPLFTSKFAPTENNSLLVQNCTSALGGCVIPTSSFTSNRMKLDGCDNRSDNISCLTRSQGQEAFDVMKFENVISSGCKYLFSSLAIDQRKDDPGASLQFQILELGWWLEGPCQCSPNATCTNVTVAAGKFGFRCQCPRGYHGDGFLNGTGCRRSVSKCNASTLTSGGCGGEAKVGFLVGGIIAGVLIVAILCLLGYYVRRRSYCLKKQLTVKRLLREAAGNSSVPFYPYKEIERATNFFSEKQRLGTGAFGTVYSGKIHNDDLVAIKKIRQRDPNSVDQVMNEIKLLSSVSHPNLVRLLGCCVEEDEQILVYEFMPNGPLSQHLQRENGKGLPWTIRLTIASETANAIAYLHSAIDPPIYHRDIKSSNILLDYNFNSKVADFGLSRLGMTEISHISTAPQGTPGYVDPQYHQNYHLSDKSDVYSFGVVLIEIITALKVVDFGRPHNEVNLAALAVDRIRRGCVDEIIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPTMMEVAEELDHIKRSGWAIMEETIASSVGSARSTLPNEAEKSFDVQLDKEQVESERLIVSERAELRDSSPVSVHDTWSSGHSSPSSNSLLGNAPQ 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2200 713 FunFam Wall-associated receptor kinase-like 14 322 430 - -
Alju09g2200 713 SMART serkin_6 355 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2200 713 Gene3D Laminin 228 263 - -
Alju09g2200 713 CDD EGF_CA 230 259 - -
Alju09g2200 713 Gene3D Phosphorylase Kinase; domain 1 316 430 - -
Alju09g2200 713 FunFam Wall-associated receptor kinase-like 20 431 640 - -
Alju09g2200 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Alju09g2200 713 ProSiteProfiles Protein kinase domain profile. 355 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2200 713 Gene3D Transferase(Phosphotransferase) domain 1 431 644 - -
Alju09g2200 713 ProSitePatterns Protein kinases ATP-binding region signature. 361 384 IPR017441 GO:0005524
Alju09g2200 713 SUPERFAMILY Protein kinase-like (PK-like) 337 627 IPR011009 -
Alju09g2200 713 Pfam Protein kinase domain 355 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2200 713 MobiDBLite consensus disorder prediction 689 713 - -
Alju09g2200 713 MobiDBLite consensus disorder prediction 683 713 - -
Alju09g2200 713 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 34 700 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2200 Alju-ChrAlju09 45341598 45345382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2200 19 713 Receptor kinase-like Gene Family AT2G23450 53.073 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Alju09g2200 Pkinase 2.4e-45 CL0016