Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2193 ATGGCTATGGCGGAGAACACCAAAACCGGTTTCTTTATCATTTGTGAAACAGAGCAATCTGCATTTTCCAACCCGAACTGCTGTATGCACAAGTTAAACAGATTCAATGTTTCCCTTCAACATGAGGCATACCAGTTGAGCATCCGCCAATCTTTCCTGCTTCATCATTACTCCTCAGCGCTTACAGTTGCAAAATCAGAGGTTACGTGCAGGGAATCCTTTTCTGGAATGCAACTCATAGCTGTTGAGTGGATAGGCTATTGTGAGAGTTTAGAAATGGGGCAAACTGGAGAAAGTTGCAGAGCGTTGGAAAGACATATATATTGGACAGAATTCGCTCCCAACAGACACCAATTTTTCAAGCTAATGATGGGAAATTTCAGGAACGAGGTGCGAATCCCAACGAAGTTTGTGAATCATTTTAAGGAGAAACTGCTGGGTACTGTAAGACTTATAGGGCCGAGTAGAAATGTGTGGGATGTGAAAATGGAAGAAACGGATGATGATGTCGTTTTTCAGATTGGTTGGGAAAAATTCGTGCAGGACCACAGTTTAGCAGAAAGAGATTTTCTTGTTTTCCAATACATTGGATTCTCTTCTTTCAATGTCTCCATTTTCGATCAAACAGGATGTGAAAGAGAAGGTTCTTTTTTCGTCAAAAAGCACATTTCGTGCACTAGAAATGCTTGCTTTCTTGAAGATGAAGAGGAGGAAATCCTGCAAATTACTGATGGGGAAGAAATGAAGGGAAAGGCAAACACAGAAGGTAGGGATGGTGCGATTGGTAAGGTGCGGGAAAGAAACCTGAGAAGCAAAACTTGTATGCTCGTTGGAACCAGGTTCAAGGCCAACAATTCAAACATAGAATCTTATGGTGCCAGGAAAGAAGACCTACGGCCAAAGAAAAGGTCAAAATCCGTCCCCCATGGACTTCATCAGGCTAAATGA 948 0.4219 MAMAENTKTGFFIICETEQSAFSNPNCCMHKLNRFNVSLQHEAYQLSIRQSFLLHHYSSALTVAKSEVTCRESFSGMQLIAVEWIGYCESLEMGQTGESCRALERHIYWTEFAPNRHQFFKLMMGNFRNEVRIPTKFVNHFKEKLLGTVRLIGPSRNVWDVKMEETDDDVVFQIGWEKFVQDHSLAERDFLVFQYIGFSSFNVSIFDQTGCEREGSFFVKKHISCTRNACFLEDEEEEILQITDGEEMKGKANTEGRDGAIGKVRERNLRSKTCMLVGTRFKANNSNIESYGARKEDLRPKKRSKSVPHGLHQAK 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2193 315 Gene3D - 112 211 IPR015300 -
Alju09g2193 315 PANTHER B3 DOMAIN-CONTAINING 114 240 - -
Alju09g2193 315 ProSiteProfiles B3 DNA-binding domain profile. 116 209 IPR003340 GO:0003677
Alju09g2193 315 CDD B3_DNA 119 207 IPR003340 GO:0003677
Alju09g2193 315 Pfam B3 DNA binding domain 119 208 IPR003340 GO:0003677
Alju09g2193 315 MobiDBLite consensus disorder prediction 292 315 - -
Alju09g2193 315 SMART B3_2 119 209 IPR003340 GO:0003677
Alju09g2193 315 SUPERFAMILY DNA-binding pseudobarrel domain 114 214 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2193 93 221 REM Transcription Factor Family AT4G33280 43.511 5.67e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju09g2193 B3 2.2e-16 CL0405