LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju09g2186	ATGTCATTTTCTCTGTTCTCGACGCCACAGCAACAACCGCTCTTTCAGCCCCAGCAGCAGCAGAGCAGTTTGTTCCTTCCGCTGCAGCAGCAACCGCAATTGCAACTCCAACAGCAGCCGCAGCCGCAGCAGCAGCAACGGCAGCAGCAACTGTTTCTTTTCACTACCGATAAAGCTCCCGCTAATTATAGTACCAAGTGGGCAGATCTTCATCCTGATTCTCAGAAGGTTCTACTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAGAGCCTGAGACTGGATCAGTGTGGTCGTTTCTATGATTCTTCAATTTCAAACGAAGGGTTTGAGCTTGATGCAAGCCACATTGTTCAGGAACTTGGGGGAATCAGCACTGCCATGGAACGACAGAAAACTTTGTTGCAGGAATTGATGTTTGTCGTTAAGGATATGTTACGCAGCACAGAGGTTGCTATTCGTTCTTTTATGATGTTACGTCCAAGGTTCCTTCATCCTAGTGGAGGAGGCGCTTCAAGCGCCACGGCTCCTTTGCAGACTCCTGGAACCACTGTAACACCTAGTTCAAGTAGCCAACCAACAACTACAACGATTGTGCCTGTTTTTGATTTTTATTATGGGCTTCCAAAGAAACCATCACCATTTTTACAGCAATCGGTCTTAAGATTTGAGAAGTATCTGGGTGAATGCCGTCAATGGATTGAAGAGTTGGAGCAGCTGCTTCTCTTAGACTCTGAGAAAAATAGTTCTAATAACAGATCCTCATTATTGGAATCTCTTCCCAAAGTCTTGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCAAAGGCGGAAAGTATTCATCAGTACATTGAATCTATGAAATCAGCTTACCTAGCTGATCAGCGTCGTTGGGGAGAGGTGAATGATCCGTTTCTAGAGGCTGATCGGCGAGAAACAGCTAGACAAGAAGCTGCCTCAAAAAGAGTTCATCCAACACTACACTTGCCTGCAAATACACAACCATCTACACAAGTTGCTGATTTGTTTTCCAGCTCAGGAACTCAAGGGACACTGACTGTTCCACAGACATCTGCAGCAACCATGTCATCTTCATCAGGAAGTGGCCTTTCACTTTTTGGCACACCATCTTCTGTTCCACCTTCCTATACGCCATCTATGTTTACAACACCAACGACTTCTGCTCCAGCACCCTCTTTGTTTGGTTCATCTAGCACTACACCCCAACCCTCAGCGTTTGGTTCTTCATCTTCCTTATTTGCTCCTTCTTCCTCTCCCTCTCTTTTCAGTTCTGCTTCACCATTTGGTGCAAGTACCGGAGGTTCACTCTTTTCGACTCCATTTGCTTCAGGTGCTGCAACAGGATCAGGGGCGAGCTTTGGGGCTGCATCAAAATCATCGAGGCCAAAATCCAGAACTGCTCGACGATGA	1437	0.4621	MSFSLFSTPQQQPLFQPQQQQSSLFLPLQQQPQLQLQQQPQPQQQQRQQQLFLFTTDKAPANYSTKWADLHPDSQKVLLQIEERILEYRDESLRLDQCGRFYDSSISNEGFELDASHIVQELGGISTAMERQKTLLQELMFVVKDMLRSTEVAIRSFMMLRPRFLHPSGGGASSATAPLQTPGTTVTPSSSSQPTTTTIVPVFDFYYGLPKKPSPFLQQSVLRFEKYLGECRQWIEELEQLLLLDSEKNSSNNRSSLLESLPKVLTNVHDFFVHVAAKAESIHQYIESMKSAYLADQRRWGEVNDPFLEADRRETARQEAASKRVHPTLHLPANTQPSTQVADLFSSSGTQGTLTVPQTSAATMSSSSGSGLSLFGTPSSVPPSYTPSMFTTPTTSAPAPSLFGSSSTTPQPSAFGSSSSLFAPSSSPSLFSSASPFGASTGGSLFSTPFASGAATGSGASFGAASKSSRPKSRTARR	478

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju09g2186	478	Gene3D	-	212	302	-	-
	Alju09g2186	478	MobiDBLite	consensus disorder prediction	454	478	-	-
	Alju09g2186	478	MobiDBLite	consensus disorder prediction	329	434	-	-
	Alju09g2186	478	MobiDBLite	consensus disorder prediction	173	195	-	-
	Alju09g2186	478	MobiDBLite	consensus disorder prediction	454	470	-	-
	Alju09g2186	478	MobiDBLite	consensus disorder prediction	312	434	-	-
	Alju09g2186	478	PANTHER	NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1	6	466	IPR024882	GO:0005643\|GO:0006913\|GO:0008139\|GO:0017056
	Alju09g2186	478	MobiDBLite	consensus disorder prediction	169	195	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju09g2186	Alju-ChrAlju09	45263081	45266668	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju09g2186	51	478	NAC Transcription Factor Family	AT4G37130	64.516	0.0	523