Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2165 ATGAATCTCTATCCTCTTGTGCCTCCTTCGTTATCATCTCTCTATCTCGGTCATGCTAGCGAAAACCTGAAGCCGACACTCTCAGTTGTCACAGAAGAAGAAATACCCCTAAACATGGACTTGAGCTTGGATTTGAGTTTGCCTTTCGTTCCCAAAACCATTTCTGAGTTTCTTGGTGAGGTCTCTAAGATCGGAGATGGGCACGACAAATTAGCGATGCTTGACGATTTTGTCAAGAGATTGGAGGATGAAATGAGGAAGATCGAAGCCTTTAAACGCGAGCTTCCTCTCTGCATGTTGCTCGTAAACGATGCTGTAACGAGGTTGAAGGAAGAGAAAGTACGGTTTGGGGAAGTGCTAGATCGACCCGAAATCGAAGAGTTCACAACATTGAAAGCAAATTCTGGCGAGAACCAACAATTAGCTATGGAAAAAGATAGCTATGACAAGAAGAATTGGATGAACTCTGCTCAACTGTGGAGCGCAGAAACCAAATTGGGAAGTGAAAATGATCGGTCTGTGCCAGAGAACCCAATTCAGTTACAAAATCTGAAAAACAGAGGAGGGGCATTTATCCCCTTTAATGAAAATTTGGGCATGTCAAAGCCAGTGGCGAAGGAAGACAAGGAAATCTCACAAGGTCCATGTCTTAGCTTGATGACTCCAACGTCTGAACTGAATCTCAAGAATTCTAAAACTTGTAGCAGAAATTGTTCGGGTGTGTCTTTCCTTGCAGGCCGGCTTGATGGACAAGTCCAACCACAACCTCAACATTTGCAACAAAATCCTAGAAAACAAAGACGATGCTGGTCCCCGGAGCTTCACCGGCGATTTGTTGATGCCCTTCAACAACTGGGAGGAGCTCAAGTGGCCACCCCTAAACAGATCAGAGAATTAATGCAAGTGGAGGGCCTAACAAATGATGAAGTAAAAAGCCATTTGCAAAAGTACAGACTTCATGTGAGAAGACTTCCAACTTCAACAATTAACCAAGGAAATGGCCTGTGGATGGTAGAAGATCAATGTGGAGAAAAGTCAAAAGTAAACTTATCACAGTCTGGTTCTCCCCAAGGACCTCTCTTACTTGCAGGTTCTGCTAAGGGTCCTTCAAGCTCTGGAGATGGTGAAGAAGATGAGAAATCAGATTGCCATAGTTGGAAAGGTGGGATGCACCAGCACGGGGAAGCTGATGTACTGTCTTGA 1203 0.4439 MNLYPLVPPSLSSLYLGHASENLKPTLSVVTEEEIPLNMDLSLDLSLPFVPKTISEFLGEVSKIGDGHDKLAMLDDFVKRLEDEMRKIEAFKRELPLCMLLVNDAVTRLKEEKVRFGEVLDRPEIEEFTTLKANSGENQQLAMEKDSYDKKNWMNSAQLWSAETKLGSENDRSVPENPIQLQNLKNRGGAFIPFNENLGMSKPVAKEDKEISQGPCLSLMTPTSELNLKNSKTCSRNCSGVSFLAGRLDGQVQPQPQHLQQNPRKQRRCWSPELHRRFVDALQQLGGAQVATPKQIRELMQVEGLTNDEVKSHLQKYRLHVRRLPTSTINQGNGLWMVEDQCGEKSKVNLSQSGSPQGPLLLAGSAKGPSSSGDGEEDEKSDCHSWKGGMHQHGEADVLS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2165 400 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 262 322 IPR017930 -
Alju09g2165 400 Gene3D - 264 321 - -
Alju09g2165 400 FunFam Myb family transcription factor 264 322 - -
Alju09g2165 400 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 42 387 IPR044787 GO:0003700|GO:0006355
Alju09g2165 400 NCBIfam myb-like DNA-binding domain, SHAQKYF class 265 320 IPR006447 GO:0003677
Alju09g2165 400 MobiDBLite consensus disorder prediction 347 400 - -
Alju09g2165 400 SUPERFAMILY Homeodomain-like 263 323 IPR009057 -
Alju09g2165 400 Coils Coil 74 94 - -
Alju09g2165 400 MobiDBLite consensus disorder prediction 372 391 - -
Alju09g2165 400 Pfam Myb-like DNA-binding domain 267 318 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2165 Alju-ChrAlju09 45078201 45079845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2165 30 315 G2-like Transcription Factor Family AT4G37180 44.521 9.63e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju09g2165 Myb_DNA-binding 1.7e-06 CL0123