Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2163 ATGTCATCATCGAATTCTCCGTGCGCTGCGTGCAAGTGTCTGAGGCGGAAATGCACGCCAGAATGCGTGTTCGCACCGTACTTCCCACCGGACAATCCTCAGAGGTTTGCTTACGTCCACAGGGTATTCGGGGCAAGCAATGTCGCTAAGCTTCTCAATGAGCTCAGCGCTGCGCAGAGAGACGACGCCGTTAAGTCTCTGGCTTACGAAGCGGAGGCCCGTCTCCGGGACCCAGTCTATGGTTGTGTGGGTCTCATCTCCGTTCTCCAGCACCGGCTCCGGCAGATCCAAGTGGAACTCAACAATGCCAAGAAGGAGCTCGCCACGTATATTGGACCTCAGGCTCTTCAGGCCATGCCTCCCACCATTCTAGCACCTTCTGGAATGATCCCTCAGCAACACCCAAGCAACCCATATTCTTCCGCCGCCGGTTATCCCTACAACAGCATGCCACCGCCAGCGCCTATGACCAATATTCCGACCGGTGGCTCTTCTCATACCGGCCAACTCATGATTCGTGACCCTTCGCAACAGCATCAGATCTTGGACGCTCAGCAGTTGGCCGTGGCCGTGGCGGCCAGAGATCAACAAGATATGTTTCGAGGTTACGAGCAGCAGCAACAAGAGTTTCTGAGATTCAATGGTGGATATGATGTGGGTTCGGTTTCTGGGAGTGGATTCAACAATCACATTTCTTCAACTGCTGCTCCCACCGACATGTCTCCTTCCTTGGCTCTCGGCTCCTTCGACAGCCCTTACGGCGGCCAGATGCAACCGCCGCAAGCCGAACACCACCACCAGCTTCAAGCTCAGCTAATGCTTTCCCCCCAGCAGCCGGAGCCACAGCAACAAAGTCAGCAGTCACAGCAACCCCACCACCAGCAGCAACCGTCAGAAAGCGAGGAGGGTAGGAGTGGCATCTGCCTTTCTTGTTGA 936 0.5566 MSSSNSPCAACKCLRRKCTPECVFAPYFPPDNPQRFAYVHRVFGASNVAKLLNELSAAQRDDAVKSLAYEAEARLRDPVYGCVGLISVLQHRLRQIQVELNNAKKELATYIGPQALQAMPPTILAPSGMIPQQHPSNPYSSAAGYPYNSMPPPAPMTNIPTGGSSHTGQLMIRDPSQQHQILDAQQLAVAVAARDQQDMFRGYEQQQQEFLRFNGGYDVGSVSGSGFNNHISSTAAPTDMSPSLALGSFDSPYGGQMQPPQAEHHHQLQAQLMLSPQQPEPQQQSQQSQQPHHQQQPSESEEGRSGICLSC 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2163 311 Coils Coil 86 106 - -
Alju09g2163 311 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 295 - -
Alju09g2163 311 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Alju09g2163 311 MobiDBLite consensus disorder prediction 233 311 - -
Alju09g2163 311 MobiDBLite consensus disorder prediction 262 305 - -
Alju09g2163 311 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2163 Alju-ChrAlju09 45058816 45059751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2163 1 252 AS2 family AT5G66870 53.731 9.34e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju09g2163 LOB 4.1e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2163 09 45058816 45059751 Alju09g2163 09 45058816 45059751 ECH