Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2146 ATGATAAGGCCAGTGAAGCTTTGTGGAAGACAAATTATGATCAAGAGATGCCCCACAAATCTGGAATTTGAGGACACCAGAGGAGGTCTAGAAGTTCGGAAGGCCAATAATCTGTTGCAGGCAGGCAGCGATTCTTGTCTGTATTGTGTTGAGATGATGGTGGGTCATGGAAAGAACCGAGGGTTAGATGATCGGTCGGGTAATAAGAAGGAGGCGGTGGACCAACCCCGTGCCTCTACGGCTGCCGGAAAAGCCGTTACTCCGCCTCGGCACGGTAAAAATGCGGATTACGATGATGACTTAACCCTAGCCAACTGGTCAAAGTCTCCCAAACGCTCCCCTCCTTCAACTACGCCCAAACGGAACAAGATGGTACAGAATCAACACAGGCTCTTGAACATTCAGAAAAAACATTTGGATCCTCCAACTAATCAAGGTTTATCCGATCAGGCACAAAAGCTTGCAAGCTCCTCTAAGGTGGCAACAGACAGGACATTATCAGGAGAGGCCAGGTCGTCTGCTGTGTTTCGAGCAGAGGTGGTCCAATCAAAGTTAGATCCCAGATTCCCTAGCTTTGTGAAGTCATTGGTTAGATCACATGTTGCTGGTGTTTTTTGGATGGGGCTCCCAGCGTTTTTCTGTAAAAGATTCTTATCGGATATTGACACTACGATTACTTTGGAAGATGAATCTGGTAAAGAATACCAGTTAAAATACATTGCTTGCAAGACAGGTTTAGGCGCTGGTTGGAGGCAGTTTTCTGCAGTCCACAAATTGCAGGACGGAGATGTTTTGGTCTTCCAGTTAGTTGAACCTTCTAAATTTAAGGTATATATAATAAGAGCAAATGGCTTGAGCGAACTGGATGGGGCGAATCTGGATGATTATACCAAGCAAAAAGCAAGAGATAATGCAAATAAGGATTCTCTGCCGAGTAATATCCCTAAGAGGAAACAAGAAAAATCTAACCCACCATCTCCAGTTATCCAAAAGAAAAAGAGGACAAGTGTGTCAAAGATTTCCCCCAAGGTTAGGCAGTGTGCAGAACAGTGTGAATATGAAAGTGATGAAGCTGGTTCAGAAGTACTGGAGGGCCATGGAATGGAGCTCAAATTCAAGGATGTAAGAGGTTTCGAAAATTTCAGTATCATAATTGATGGAATTCCAATAGATAATGAGCTGCCCCAGGAGGTTCGAAATAAGTATTACAAATTGTGCCATAGCCAGCAGGCCTTCCTACACGAGAATCTCATAAAGGGCATCAACCATAACCTCATTGTGGGCATTATATCTGAAGTTGTCAACATTGCTGATGCCTTGAGATCCAGCTCACTTCGAATCTCAGCAGCTGAATTTGCTAAATGGGATAAGGAGTTGCTGGCATTTGAGTATTTGGGGATGAATATGGAATTTTTAAGACACCGGTTAGTTAGGTTTCTAAACTTGGCATATGAAACACAAGATGCATATGAAACACAGGATGCCTCTGAGACTTCAAGGTATTCAACGTCCCCAACTGAGTTCAGTCGAGCAGATAACGAAATAATGAATATTGAAACAAAGCTTGGAGAATTGAAAGAAGCTTGTGATGGTTTTGGTGCTTATATTGAGAGTTTGAAGTACAAAGCTGAGCGCTTCCATAATCACTAG 1650 0.4321 MIRPVKLCGRQIMIKRCPTNLEFEDTRGGLEVRKANNLLQAGSDSCLYCVEMMVGHGKNRGLDDRSGNKKEAVDQPRASTAAGKAVTPPRHGKNADYDDDLTLANWSKSPKRSPPSTTPKRNKMVQNQHRLLNIQKKHLDPPTNQGLSDQAQKLASSSKVATDRTLSGEARSSAVFRAEVVQSKLDPRFPSFVKSLVRSHVAGVFWMGLPAFFCKRFLSDIDTTITLEDESGKEYQLKYIACKTGLGAGWRQFSAVHKLQDGDVLVFQLVEPSKFKVYIIRANGLSELDGANLDDYTKQKARDNANKDSLPSNIPKRKQEKSNPPSPVIQKKKRTSVSKISPKVRQCAEQCEYESDEAGSEVLEGHGMELKFKDVRGFENFSIIIDGIPIDNELPQEVRNKYYKLCHSQQAFLHENLIKGINHNLIVGIISEVVNIADALRSSSLRISAAEFAKWDKELLAFEYLGMNMEFLRHRLVRFLNLAYETQDAYETQDASETSRYSTSPTEFSRADNEIMNIETKLGELKEACDGFGAYIESLKYKAERFHNH 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2146 549 MobiDBLite consensus disorder prediction 58 124 - -
Alju09g2146 549 MobiDBLite consensus disorder prediction 306 339 - -
Alju09g2146 549 SUPERFAMILY DNA-binding pseudobarrel domain 185 284 IPR015300 -
Alju09g2146 549 ProSiteProfiles B3 DNA-binding domain profile. 192 283 IPR003340 GO:0003677
Alju09g2146 549 MobiDBLite consensus disorder prediction 138 165 - -
Alju09g2146 549 Gene3D - 169 284 IPR015300 -
Alju09g2146 549 MobiDBLite consensus disorder prediction 58 72 - -
Alju09g2146 549 SMART B3_2 192 283 IPR003340 GO:0003677
Alju09g2146 549 MobiDBLite consensus disorder prediction 106 124 - -
Alju09g2146 549 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 113 284 IPR044837 -
Alju09g2146 549 Pfam B3 DNA binding domain 192 282 IPR003340 GO:0003677
Alju09g2146 549 MobiDBLite consensus disorder prediction 298 339 - -
Alju09g2146 549 Coils Coil 508 528 - -
Alju09g2146 549 CDD B3_DNA 190 281 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2146 Alju-ChrAlju09 44888367 44893282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2146 167 307 B3 DNA Binding Superfamily AT3G19184 46.575 2.50e-33 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Alju09g2146 B3 1.7e-15 CL0405