Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2137 ATGTCATCGCAGAGATCGGTGCCGGCGCCGTTTCTGACGAAGACGTACCAGTTGGTGGATGATCCGGCCACCGACGACGTCATATCGTGGGGTGAGAGTGGGAACACGTTCGTGGTGTGGAAGCATGCGGATTTTGCCAAGGATCTACTTCCCAACTATTTCAAGCACAACAACTTCTCGAGCTTCGTCCGCCAGCTCAACACCTATGGATTCCGGAAGATTGTTCCTGACAAATGGGAATTTGCAAACGAATATTTCAAGCGAGGACAGAAGGAGCTGTTGGCAGAGATCAAACGTCGGAAGCCCGTGGTGCAATCGGCGGCGCAGGTGCCTGCGGGGTCGAACTCCGGCGGGGACGACATGGGATCTTCCTCAACTTCGAATCTGGGAACCGTAGAGACGACGAGTCCTCAAGTGGCGAATTTATCGGGGGAGAACGAGAAATTGAGGAAGGATAACGAGATGCTGAGCTGGGAGCTGGTGCAAGCGAAGAAGCAGTGCGAGGAGCTGTTAAGTTTTCTGAAGGAGCACGTGAAGATGGGTCCGGAGCAGATCCATGGGATCATGCGGCAAGGAAGTTGTGGGTCCAGCCGCAAACACGAAGGCGAAGATGACGACGAAAAGGCTGTAGGTGTAGGTGAAGGGGAGGGGTCTGGTGGGGAAAGCCTGAAGCTCTTTGGGGTCAGGTTGAACATAAACCATGGCCCCACCTCCACCACCAAGAGAGGGCGCGAAGACCAAAGCGGGTGTGGTGGTCCTCACTCTAATAAGCAGCTGAAAACTGTTGACTTTGTTTCACCTGTGATGATGAAGAGCAGCAAGGTCTGCAACTGA 834 0.5396 MSSQRSVPAPFLTKTYQLVDDPATDDVISWGESGNTFVVWKHADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEYFKRGQKELLAEIKRRKPVVQSAAQVPAGSNSGGDDMGSSSTSNLGTVETTSPQVANLSGENEKLRKDNEMLSWELVQAKKQCEELLSFLKEHVKMGPEQIHGIMRQGSCGSSRKHEGEDDDEKAVGVGEGEGSGGESLKLFGVRLNINHGPTSTTKRGREDQSGCGGPHSNKQLKTVDFVSPVMMKSSKVCN 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2137 277 MobiDBLite consensus disorder prediction 106 140 - -
Alju09g2137 277 SUPERFAMILY "Winged helix" DNA-binding domain 8 100 IPR036390 -
Alju09g2137 277 ProSitePatterns HSF-type DNA-binding domain signature. 50 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju09g2137 277 Gene3D - 3 101 IPR036388 -
Alju09g2137 277 MobiDBLite consensus disorder prediction 108 140 - -
Alju09g2137 277 Coils Coil 139 166 - -
Alju09g2137 277 MobiDBLite consensus disorder prediction 232 260 - -
Alju09g2137 277 FunFam Heat stress transcription factor B-4 3 101 - -
Alju09g2137 277 Pfam HSF-type DNA-binding 11 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju09g2137 277 PRINTS Heat shock factor (HSF) domain signature 11 34 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju09g2137 277 PRINTS Heat shock factor (HSF) domain signature 49 61 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju09g2137 277 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju09g2137 277 MobiDBLite consensus disorder prediction 190 218 - -
Alju09g2137 277 SMART hsfneu3 7 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Alju09g2137 277 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 4 204 IPR027725 -
Alju09g2137 277 Gene3D - 132 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2137 Alju-ChrAlju09 44858492 44861619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2137 2 277 HSF AT4G36990 52.595 2.70e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Alju09g2137 HSF_DNA-bind 3.7e-33 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2137 09 44858492 44861619 Alju12g0189 12 2346468 2348360 CCT
Alju09g2137 09 44858492 44861619 Alju09g2137 09 44858492 44861619 ECH