Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2123 ATGGACTGGGATCGAGGATCGTCTCTTGGTACCGGAACCTTTGCCTCCGTTCACTTGGCCATTCCCACACATACTTCTTCTCAATTTTCATCCCCTGCCGCCGTCAAGTCCGCTGGCGTCTTCGCTTCTTCTTCCCTCCAGAACGAACAATTCGTACTCAATCGCCTTGGACTCTTCCCCCAAATTATCAGGTGTTTCGGCCATGATTCTACCTTCGAAAACGGTGTCCACTATTATAATTTGTTCCTAGAATACGCCGCCGGCGGTAGTCTCGCTGATCAGCTCAAAATTCGCGGCGGTCGCTTGCCGGAACCCGATATCCGCCGATACACCAGGTCCATCGTCCAGGGACTCAGGCATATTCACGCCAATGGCTTCGTCCACTGTGATATAAAGCTTCCCAACATTCTCCTCTTTGCCAATGGCGACGTCAAGATTGCCGACTTTGGACTCGCCAAGAAGTCAGGGGAACAACAGAGCAACGAAGAGACCAAGTATGAGATCAGGGGAACTCCTGCGTGTATGTCCCCGGAATCAGTAAGCGACAATGAGTATGAATCTCCGGCCGATATATGGGCTCTCGGATGTGCTGTGGTGGAGATGATCACTGGAAAACCCGCCTGGGATTTGAAGGATGAATCCAATATTTTCTCGCTGTTGATGCGGATCGGGTCAGGAGAAGAATTACCCGAAATCCCCAATGATATGTCAGAAGATGGGAAGGATTTCCTGAGAAGATGTCTTGTGAAAGATCCTAGAAAAAGATGGACGGCGGAGAAGCTCTTGGAGCATCCCTTTGTCGCCGACGAAACTGTTTCATTAGAGCGTATGAAAGAACCGTCGACGTCGCCGAGAAGTCACTTCGATTTTCCAGACTGGGTTTCCAATACAACAACTTCAGCCCTGAATTCACCGGAATCTGATGACCGGAATGACTGGAAATTTGAATCGCCGTGCCTGTCCAGTACCTGTTCGCCGGAGGATAGGCTCAGGGAGTTGGTGACGACTGAGACGCCAAATTGGTCGGAATCTGACAGATGGATCTGCGTTAGATGCGAATAG 1062 0.5038 MDWDRGSSLGTGTFASVHLAIPTHTSSQFSSPAAVKSAGVFASSSLQNEQFVLNRLGLFPQIIRCFGHDSTFENGVHYYNLFLEYAAGGSLADQLKIRGGRLPEPDIRRYTRSIVQGLRHIHANGFVHCDIKLPNILLFANGDVKIADFGLAKKSGEQQSNEETKYEIRGTPACMSPESVSDNEYESPADIWALGCAVVEMITGKPAWDLKDESNIFSLLMRIGSGEELPEIPNDMSEDGKDFLRRCLVKDPRKRWTAEKLLEHPFVADETVSLERMKEPSTSPRSHFDFPDWVSNTTTSALNSPESDDRNDWKFESPCLSSTCSPEDRLRELVTTETPNWSESDRWICVRCE 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2123 353 SMART serkin_6 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2123 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Alju09g2123 353 CDD STKc_MAPKKK 2 267 - -
Alju09g2123 353 Pfam Protein kinase domain 5 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2123 353 SUPERFAMILY Protein kinase-like (PK-like) 3 305 IPR011009 -
Alju09g2123 353 ProSiteProfiles Protein kinase domain profile. 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2123 353 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Alju09g2123 353 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Alju09g2123 353 Gene3D Transferase(Phosphotransferase) domain 1 93 314 - -
Alju09g2123 353 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2123 Alju-ChrAlju09 44762869 44763930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2123 1 351 MAP Kinase Kinase Kinase AT4G36950 52.542 1.93e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Alju09g2123 Pkinase 1.8e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2123 09 44762869 44763930 Alju12g0199 12 2431025 2432077 CCT
Alju09g2123 09 44762869 44763930 Alju09g2123 09 44762869 44763930 ECH