Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2118 ATGCTTGATCCTTCCTCTCCCGCCATGAACGACCAGCTCTCCAGACCCACTTCAATCTTTGGACTCCGATTGTGGGTTGTGCTCGGGGTGTGTGTCGGAGCCGCCGTCGTGCTGCTTCTCTTCCTCATTTCTATCTGGCTCGTTTCCAAGCGCTCCAAGACTAATCCCACTCACAGACCATCAATCCCAAATGTCTCCAAAGAGATCCACGAGATTAGAATCGACCATCACCACGATTCCAAGCTAAAAGGAACCCGTATCCTATCCGACCCGTCTCCCGAACTCGACCCGCTTCCCGGAATTGAACGCCAGGCTCTGCTCCCAGCATCGGAAGAAGAAAATCCATCGGGGATCAACCGAATTCAATTTGAGATTGGGAAGAATCATAGAATTTCGTTCCCTGAACGTGCTCTGGCTCGGTCGTCTTCGCACGGAAGTGGGGAGGTACGGCCCGTCGATCAGGTACCTACGGTGATTCCTGAAGTGTCGCATTTGGGTTGGGGTCACTGGTATACTCTGAGAGAGCTCGAAGATGCGACGAATGGGTTCGCCGACGAGAACGTAATCGGTGAAGGCGGCTACGGAATTGTTTACTATGGTATTCTGAAGGATAATACTAATGTTGCAGTTAAGAATTTGCTCAATAATAGGGGACAAGCTGAGAAAGAGTTCAAGGTCGAAGTGGAAGCTATAGGACGAGTCCGGCACAAGAATTTAGTAAGGTTGCTGGGATATTGTGCTGAAGGAGCTCATAGAATGCTCGTATATGAGTACGTTGACAATGGGAACTTGGAGCAGTGGCTGCATGGGGATGTTGGGCCTTGCAGTCCTCTGAATTGGGAAATTCGAATGAACATTATTCTGGGAACAGCAAAAGGGCTAGCTTATCTTCACGAGGGGTTGGAACCAAAAGTTGTTCACCGTGATATTAAATCAAGCAACATTCTGATCGACAAGCAATGGAATTCAAAGGTGTCAGACTTTGGGCTTGCAAAACTCCTTGGCTCTGATAGCAGCTACATTACCACACGTGTCATGGGCACATTCGGATATGTAGCTCCCGAATATGCAAGTACTGGAATGTTAAATGAACGAAGTGATGTGTACAGTTTCGGAATTCTTATTATGGAAATAATTACAGGAAGGAATCCAGTTGATTACAGTCGGCCTTCAGAAGAGGTCAATTTAGTTGACTGGCTCAAGAAGATGGTTAGTGACAGGAATGCAGAGGGAGTGTTGGATCCCAAGCTCCCTGAGAAACCAAGTTCAAGGGCACTCAAGCGAGCCCTTCTTGTAGCTTTACGTTGCACTGATCCTAATGCTCAAAAGCGACCTAAAATGGGGCATATCATACATATGCTCGAAGCTGAGGATTCTTCTCACAAAGAGGATCGCAAGGCGAAAAGGGATGCGGAAAATTCATGTAATGATGAGGATAGATCAAAAGGGGAGACAACTGTGTCTGGTGATGATGATGGTAAAGTTTGA 1488 0.4724 MLDPSSPAMNDQLSRPTSIFGLRLWVVLGVCVGAAVVLLLFLISIWLVSKRSKTNPTHRPSIPNVSKEIHEIRIDHHHDSKLKGTRILSDPSPELDPLPGIERQALLPASEEENPSGINRIQFEIGKNHRISFPERALARSSSHGSGEVRPVDQVPTVIPEVSHLGWGHWYTLRELEDATNGFADENVIGEGGYGIVYYGILKDNTNVAVKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLNWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLGSDSSYITTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIITGRNPVDYSRPSEEVNLVDWLKKMVSDRNAEGVLDPKLPEKPSSRALKRALLVALRCTDPNAQKRPKMGHIIHMLEAEDSSHKEDRKAKRDAENSCNDEDRSKGETTVSGDDDGKV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2118 495 ProSiteProfiles Protein kinase domain profile. 183 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2118 495 SUPERFAMILY Protein kinase-like (PK-like) 159 455 IPR011009 -
Alju09g2118 495 MobiDBLite consensus disorder prediction 455 495 - -
Alju09g2118 495 ProSitePatterns Protein kinases ATP-binding region signature. 189 211 IPR017441 GO:0005524
Alju09g2118 495 SMART serkin_6 183 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2118 495 FunFam Probable serine/threonine-protein kinase At1g01540 163 258 - -
Alju09g2118 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 305 317 IPR008271 GO:0004672|GO:0006468
Alju09g2118 495 FunFam Putative receptor-like serine/threonine-protein kinase 259 469 - -
Alju09g2118 495 Pfam Protein kinase domain 184 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2118 495 CDD STKc_IRAK 189 455 - -
Alju09g2118 495 PANTHER OS01G0323000 PROTEIN 8 480 - -
Alju09g2118 495 Coils Coil 203 223 - -
Alju09g2118 495 Gene3D Phosphorylase Kinase; domain 1 162 258 - -
Alju09g2118 495 Gene3D Transferase(Phosphotransferase) domain 1 259 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2118 Alju-ChrAlju09 44734449 44736995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2118 164 455 Receptor kinase-like Gene Family AT4G02010 45.946 1.10e-88 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Alju09g2118 Pkinase 8.7e-48 CL0016