Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2115 ATGGGGGATATGTATAGCTATGATGATACTGAGAATCATGATTTCCTTGCGTCTTCAACCTCATCTTCACCTCAAGACGAGATCTCGCTTTTCCTTCGCCAGATTCTCCTTCGTTCATCCTCCTCCTTGTCAGCTTCATCGTCGCTACTTGTGACCGACACGGTGAAAAACGCCCACACCTCGGCTGGACTCTGCAGTTCCCACGCCACACTGGAGAATGCTCACGCTTCTGACCGATCATCACTTTTCCAAGATGGGATCTCCGTCGTCGTTGATTCCTCCTTTGGAGTAGGCGCTCCAAACGATGGTTTTCTTTCCTCCTCGGGGACTTATACGTTGGCCAATATGAAGGGTGATTCTGCTGTAAACATGCCGTCGTCTTCTTTTGGAGTAAGTGAGAATGAGTTCGATGAGTATGATTGCGAGAGTGAGGAGGGGATCGAAGCATTGGTGACACAGGAGCCGGTGATGTCAGTTCCTCCGAGGAGTTCATCAAAGAGAAGCAGAGCTGCGGAAGTTCATAATTTGTCTGAAAAGAGAAGGAGAAGCAGGATTAACGAAAAAATGAAGGCATTGCAAAATCTGATTCCAAATTCAAACAAGACAGACAAGGCTTCGATGCTGGATGAAGCAATTGAATACCTGAAACAACTTCAGCTCCAAGTACAGATGCTGTCAATTAGAAATGGGTTGAGTTTGCATCCCATGTGCTTTTCTGAAGACTTGCAGGCTCAGCAATTTTGTCAGATGAGATCTGAGCTCAATGAAGAAAACAGTTCTTTGCCTTCAAACATGGAAACTACTCTGCCTTTGACCCAAGAAAACCCCTTGCAATATGAGTCCAAATCCAGTCTACCTGACAAACCCAATACACAGAACCAACCATTAGTGCCCTCTCCATCATATACAATCAACCCAGAAACTACTTTTGTTCTAGATTCCCCAATTCTGCCACATACAAGATCTCTTCCACAGAAAAGAACTTGTGAGATGCGTAGCAATGAGATGATATTGCGGCACCAGCAATTAAATGCGAGCCATTCAGATATCAAACCTTTAGGTGGTTCTCAAGTATCACACACCTTTGATATGCAAACACCCGAGCAGAAGGGCAAGGGCTTTGAAACCGGCGTTGTGGGAAAAGATCAATTGGCATCGATCTTGAGAAATAGCGTAAACAACGTTAATATTACGTCACGGTTTCGGAGATTACAGGCGGGAGAAAGTATATGCGAAGACGACATCAAGACAGAAAAACCTAGTTTGCGAAGTTTTTGA 1278 0.4476 MGDMYSYDDTENHDFLASSTSSSPQDEISLFLRQILLRSSSSLSASSSLLVTDTVKNAHTSAGLCSSHATLENAHASDRSSLFQDGISVVVDSSFGVGAPNDGFLSSSGTYTLANMKGDSAVNMPSSSFGVSENEFDEYDCESEEGIEALVTQEPVMSVPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSIRNGLSLHPMCFSEDLQAQQFCQMRSELNEENSSLPSNMETTLPLTQENPLQYESKSSLPDKPNTQNQPLVPSPSYTINPETTFVLDSPILPHTRSLPQKRTCEMRSNEMILRHQQLNASHSDIKPLGGSQVSHTFDMQTPEQKGKGFETGVVGKDQLASILRNSVNNVNITSRFRRLQAGESICEDDIKTEKPSLRSF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2115 425 MobiDBLite consensus disorder prediction 279 303 - -
Alju09g2115 425 FunFam Basic helix-loop-helix transcription factor 164 227 - -
Alju09g2115 425 CDD bHLH_AtPIF_like 169 231 IPR047265 -
Alju09g2115 425 Pfam Helix-loop-helix DNA-binding domain 173 219 IPR011598 GO:0046983
Alju09g2115 425 Coils Coil 208 228 - -
Alju09g2115 425 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 21 351 IPR031066 -
Alju09g2115 425 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 218 IPR011598 GO:0046983
Alju09g2115 425 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 228 IPR036638 GO:0046983
Alju09g2115 425 MobiDBLite consensus disorder prediction 167 181 - -
Alju09g2115 425 SMART finulus 175 224 IPR011598 GO:0046983
Alju09g2115 425 MobiDBLite consensus disorder prediction 155 181 - -
Alju09g2115 425 Gene3D - 164 227 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2115 Alju-ChrAlju09 44712212 44714856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2115 7 365 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 40.584 3.92e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju09g2115 HLH 5.1e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2115 09 44712212 44714856 Alju09g2115 09 44712212 44714856 ECH