Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2113 ATGATGAACCATCAAGTTACTGGAGGTTTAGGTCAAAACAATTCTAATGAAAGCATCCAAAGTGAGGCCAACCATTCGGAATCAACTGAAGCCCTGGGAGCTGTGTCCTCACCAAGTTCTCGTAATGGAAGCATCCAAAGTTTCCCAAATAGTCTTAATGGGCTAAATTTTCTCCTTTATCAAGAGCATCTTAATAGCGTTCAAAGCAATGATCTTGGTGTGGGTGTTATCCATCATAACCTAGACTTAAGTGCAGAATATGTGGAAAATGGTCATCACACCAATCAGAATGTGTCAGTAGGTTTGTGCCTACATCCTTTTGAACCTGATGCACCAGACAATCAAAGTGACAGTAATTTATCTGGTTTATTGGCAAGTGACAGTGGAACATCCTATGTAGTAGATGAACAAGGAGTGAATAACAGCTTAGTGAATATGAGTTATTTGTCCTCCAATAGTTCTCCTGAACATGCTTCTAGAGAATTGTTAACAGGTGAAAGTTCTAGATCAGCTGTGCAAGCTAGGACCCCCATATCACAGGCTGCTGCTGTCCAAGTCAATACCAGTAACAGCTTGAGCATAGCAGCTCCTTATAATGGTGCTACAAATATCCGCCCACAACAGTCTGATGATGAATTAGGTCATCGGACTATAATGCCAATTTCTAACATGCAACAATTAAATGAAGCTAGGCATCGTCCTGCTAATGGTTCTCTATTTTCATTTGAGGCTGGAAGTGATCATGGTATTACCAGGCCAAGTTATGACATGCTACACTTCAGTCACGCTGGACAACTTGGACAATTTCAAAGCAATAATCAGACAGATGCTAGTCCAGCAGCTTTTGTACCATCCAGCAATTTGTCAATGGGGCATGCAAGTAACTTTCATGCTATTTTTCCCAGTCAAACACCCCAGCATCACCAACAAAACGATCCTCATTTCTTTAGCCAAGCACAAGCTTCAGTTGGTGCAATTCCCTATGGGCAACTATTTGTGCAGTTTCCTGATTTTCATGATATCCTGCTGCCTGCCCCTTGGGTTAATGTTATGGGGCTGAGAAGTTTCGCACCTCCCTTTTCAACTGTTTATGCTGCGCCTGGAGGCGGAAACCCTGACAACATTCCAAGAAATATCATGCTTGGTTCTCAAACTGGAGCTCAGTCAACTTATCCAGCAAACTGGAATTTTGACCATGGAACTGCAAACTTTCTTGGAAATTTTGTTTCCCCTTCCCATTATGGTCCGTTTTTAGGTAGTCATTTATTGATTGCTCCTACTGGTGTCCATTGGTTCAATGCTTTCGAACAGCATATGCCAACGTTATTTGGAGTTGTTTCTGCAGCTGCACCTATTGGTTTCCTGGGGCCAAGGAGAAATAACCAATTAGATTTAAACCCTCCAGCAATCTTTCAAGAAAGGGACTTGCCTACTGTAATTAATAGTGCTGGGGTTCAGAATCAGCTCAGGGTGTCACAAAGATCGGAGAATCAATCTTACCTTAATATGGGACCTCCTTTTACTGATGGAGCCAGAAACAATCTGTTAAGTGAGGTAATTAGGCAACCTGTACCTGGATTGAGTGAAGAAGATATTATGGCACGCCTTAGGCTTGAAGAGTTCCAATCGCCCCCAGGGGTAACTCCAGAAAATGTTGATGCCTGTTGCATATGTCAGGAAAACTATGCCGATGGGGAGGACAATGGGGTGTTAGATTGCGGGCACAAGTTTCACTATGACTGTGTCAAAAAATGGTTGCGCATCAAGAACACCTGCCCCATCTGCGTACGGACAGGACTAGCTGTGTGA 1809 0.4295 MMNHQVTGGLGQNNSNESIQSEANHSESTEALGAVSSPSSRNGSIQSFPNSLNGLNFLLYQEHLNSVQSNDLGVGVIHHNLDLSAEYVENGHHTNQNVSVGLCLHPFEPDAPDNQSDSNLSGLLASDSGTSYVVDEQGVNNSLVNMSYLSSNSSPEHASRELLTGESSRSAVQARTPISQAAAVQVNTSNSLSIAAPYNGATNIRPQQSDDELGHRTIMPISNMQQLNEARHRPANGSLFSFEAGSDHGITRPSYDMLHFSHAGQLGQFQSNNQTDASPAAFVPSSNLSMGHASNFHAIFPSQTPQHHQQNDPHFFSQAQASVGAIPYGQLFVQFPDFHDILLPAPWVNVMGLRSFAPPFSTVYAAPGGGNPDNIPRNIMLGSQTGAQSTYPANWNFDHGTANFLGNFVSPSHYGPFLGSHLLIAPTGVHWFNAFEQHMPTLFGVVSAAAPIGFLGPRRNNQLDLNPPAIFQERDLPTVINSAGVQNQLRVSQRSENQSYLNMGPPFTDGARNNLLSEVIRQPVPGLSEEDIMARLRLEEFQSPPGVTPENVDACCICQENYADGEDNGVLDCGHKFHYDCVKKWLRIKNTCPICVRTGLAV 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2113 602 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 29 599 IPR045191 GO:0061630
Alju09g2113 602 Pfam Ring finger domain 554 595 IPR001841 -
Alju09g2113 602 ProSiteProfiles Zinc finger RING-type profile. 555 595 IPR001841 -
Alju09g2113 602 MobiDBLite consensus disorder prediction 150 171 - -
Alju09g2113 602 MobiDBLite consensus disorder prediction 1 45 - -
Alju09g2113 602 SMART ring_2 555 595 IPR001841 -
Alju09g2113 602 SUPERFAMILY RING/U-box 554 596 - -
Alju09g2113 602 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 533 599 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2113 Alju-ChrAlju09 44696714 44701347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2113 516 602 C3H Transcription Factor Family AT2G15530 43.333 4.30e-19 89.4