Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2103 ATGTGGGATCTGAATGACTCGCCCGATTGGAGAAAGGACGAGGAATCCGAAGGTTGCTCTTCCTTGAAGACATCCATGGACGGAGAGGACGACAAAGGGAAACGGGTCGGATCTATGTCCAATTCAAGCTCTTCTGCGGTCGTCATCGAGGACGGATCGGAGGAGGAAGACGGCGAGAGGAGCAGAACATTGAAGAAGAAAAGCAGCAGCAAGATATTCGGGTTCTGTGTCAACCAGGACGAGTCTATGGACACTGACCCGCCCGTGACCCGTCAGTTTTTCCCGGTGGAGGAGGAGGAGGCGGCGGCCGTGTCATCGGGTGGTGGAGGGAGCACGGCCTTTCCTCGGGCTCACTGGGTGGGCGTGAGATTCTGTCAGCCGGAACCAGTATCCGCCGCCGCTGGTGGCAGAGGAAAATCCGTGGAAGTGTCGTCGCAGCCGATGAAGAAAAGCCGGCGAGGACCAAGGTCAAGAAGCTCTCAGTATAGGGGAGTCACGTTTTACAGAAGAACAGGTCGTTGGGAGTCACATATATGGGATTGTGGAAAACAAGTGTATCTGGGTGGATTTGACACGGCACATGCAGCTGCTCGTGCGTATGATAGAGCGGCCATCAAGTTCCGAGGAGTAGAGGCCGACATCAACTTCAACATTGAAGACTACGAAGAAGACTTGAAGCAGATGAGCAATTTAACAAAGGAAGAGTTTGTGCACGTACTTCGTCGACAAAGCACTGGGTTCCCCAGGGGAAGCTCCAAGTATAGAGGCGTAACTTTGCACAAATGTGGAAGATGGGAGGCTCGAATGGGCCAATTTCTTGGCAAAAAGTACGTTTATCTTGGTTTGTTTGACACGGAGATTGAAGCTGCAAGGGCTTATGACAAAGCAGCAATAAAATGTAATGGCAAAGAGGCCGTCACTAATTTCGATCCCAGCATCTACGAGCATGAGCTTAATTCTGAATCCTCGGGTAACGCCGCGGATCACAATCTGGACTTAAGTCTGGGCAATTCGAGCTCAAAGCAAGGCAGTAATAGTCAAGCACTGGGGAATGATGCCCATAACAGTGGAATGGATCATCACCAAATGGCATCGGAATCTGGTTGGAGGAACAATGGAGGATTACTCAAGCCTAAGTTGACGCTGCTGGATGGTCAAACCCAGCTTCAATCTGCAGCATCAAGAGAAATGCAAAGATTTGGCGGCTACAGGACAACTAGAGAGCCTCAAATGCTCAACAGTTTTGCTCCATCCCATCTTCACCCACCAAGCTTTCATTTTCCAAGCAGCAGCAGCGAAGGGCGGATTGGGAGTGATCTTTCACTGTCAATGAGTGATCATCAGCATCACCAATTGGGGCCTCCTCCTCCTATTCATCAGGCTCATTATATAGCAACTGCTGCAGCATCATCAGGATTCCCAACGCAGATTAACAGGCTTTCACAACGATGGCTGCAGAAAAATGGGTTCCACACTCTCATGAGACCCAACTGA 1494 0.5047 MWDLNDSPDWRKDEESEGCSSLKTSMDGEDDKGKRVGSMSNSSSSAVVIEDGSEEEDGERSRTLKKKSSSKIFGFCVNQDESMDTDPPVTRQFFPVEEEEAAAVSSGGGGSTAFPRAHWVGVRFCQPEPVSAAAGGRGKSVEVSSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYEHELNSESSGNAADHNLDLSLGNSSSKQGSNSQALGNDAHNSGMDHHQMASESGWRNNGGLLKPKLTLLDGQTQLQSAASREMQRFGGYRTTREPQMLNSFAPSHLHPPSFHFPSSSSEGRIGSDLSLSMSDHQHHQLGPPPPIHQAHYIATAAASSGFPTQINRLSQRWLQKNGFHTLMRPN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2103 497 Pfam AP2 domain 252 301 IPR001471 GO:0003700|GO:0006355
Alju09g2103 497 Pfam AP2 domain 161 209 IPR001471 GO:0003700|GO:0006355
Alju09g2103 497 ProSiteProfiles AP2/ERF domain profile. 161 217 IPR001471 GO:0003700|GO:0006355
Alju09g2103 497 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 83 398 - -
Alju09g2103 497 FunFam AP2-like ethylene-responsive transcription factor 252 312 - -
Alju09g2103 497 SUPERFAMILY DNA-binding domain 252 312 IPR016177 GO:0003677
Alju09g2103 497 MobiDBLite consensus disorder prediction 1 66 - -
Alju09g2103 497 FunFam AP2-like ethylene-responsive transcription factor 160 219 - -
Alju09g2103 497 SUPERFAMILY DNA-binding domain 160 218 IPR016177 GO:0003677
Alju09g2103 497 MobiDBLite consensus disorder prediction 319 369 - -
Alju09g2103 497 SMART rav1_2 161 223 IPR001471 GO:0003700|GO:0006355
Alju09g2103 497 SMART rav1_2 253 316 IPR001471 GO:0003700|GO:0006355
Alju09g2103 497 MobiDBLite consensus disorder prediction 319 371 - -
Alju09g2103 497 PRINTS Ethylene responsive element binding protein signature 292 312 IPR001471 GO:0003700|GO:0006355
Alju09g2103 497 PRINTS Ethylene responsive element binding protein signature 254 265 IPR001471 GO:0003700|GO:0006355
Alju09g2103 497 MobiDBLite consensus disorder prediction 1 36 - -
Alju09g2103 497 CDD AP2 252 312 IPR001471 GO:0003700|GO:0006355
Alju09g2103 497 ProSiteProfiles AP2/ERF domain profile. 253 310 IPR001471 GO:0003700|GO:0006355
Alju09g2103 497 MobiDBLite consensus disorder prediction 131 162 - -
Alju09g2103 497 Gene3D AP2/ERF domain 160 219 IPR036955 GO:0003700|GO:0006355
Alju09g2103 497 Gene3D AP2/ERF domain 252 311 IPR036955 GO:0003700|GO:0006355
Alju09g2103 497 CDD AP2 161 218 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2103 Alju-ChrAlju09 44603550 44606053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2103 1 496 AP2-EREBP Transcription Factor Family AT4G36920 54.475 3.58e-141 411
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Alju09g2103 AP2 3.4e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2103 09 44603550 44606053 Alju12g0209 12 2585960 2588840 CCT
Alju09g2103 09 44603550 44606053 Alju09g2103 09 44603550 44606053 ECH