LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju09g2096	ATGCCTCCTCCCCGAACACCCTTGCTTGTCCTCTTCTTCTTTTCCTTCTCCCTCCTCCTATCTTCCTCTTCCGGCGCCGCCTCCTCCACCATCGACTTGCTCCTCCCTTCCGACGCCGTCTCCCTCCTCTCCTTCAAATCCAAAGCCGACCCTGGTAACAAGCTCCTTTACGCCCTCAACGAGCGCTACGACTATTGCCAATGGCAGGGCGTCAAATGCGCCCATGGCAGAGTCGTTCGCTTCGTCCTTCAGAGCTTCGGCCTCCGTGGCGTCTTCCCTCCCGATACCTTGTCTCGTCTCGACCAGCTTCGAGTTCTCAGTCTTCGCAACAATTCCCTCTTTGGTCCCATTCCCGATCTCTCCTCTCTCCTCAATCTCAAATCCCTCTTTCTCGACCATAATTCCTTCTCTGGTTCTTTTCCCCCTTCGATTCTCTTCCTCCATCGCCTTCTCACTCTTTCTCTCTCCCACAACAACCTCACCGGCTCCATCCCCACCGGTTTAACTCTCCTGGACCGATTGATTTCTCTTCGCCTCGATTCCAACTGGTTTAACGGAACCATTCCTCCCTTGAACCAGTCCTCGCTTCAAATCTTCAATGTGTCCGGAAACAATTTGACTGGGCCGGTTCCCATGACGCCTACACTCAGTCGTTTTTCCCCGGCGTCGTTTTCCGGGAACCAGGGTCTGTGCGGGGAGATCATTCACTTGGCATGTAATTCTCGGTCTCCGTTCTTCAGTCCCTCTAATGCCTCCTCCGCCTCGCCACTTGGGCAAAGCGCGGAATCGCAGGGAATCGTGGTCGTTCCTTCACATTCATCTACTAAAGAGAAGCATAAGAACACTGCCTTGATTCTAGGATTTACCATTGGGTTCTCGGTGCTCATTGCGTCCATCTTGTTAGCAATTGCATTGTTTAGGAAACGAGGCAGTTCTAGAAGACCAGAGAGCCCCAAAATACAAGAGTCTTTGGAAACCAAAGAAGTAAATGCGCCGCCTCCTTCATCTTTAGCTGTCGAAACAGAAATAGAGCAAAATAGGGAATGGAGTGAGAAGGCAAAGAAGATAGAGAAAATAAGAGAAGCACATAAAAGTGGGAATTTGGTGTTCTGCAGCGGGGAGCCACAGTTGTGTACAATAGAGCAGTTGATGAGAGCTTCGGCGGAGTTGCTGGGTAGGGGTAACATAGGAACAACGTACAAGGCGGTGTTGGATGGTCATCTCATAATGACAGTGAAGAGGCTGGATGCTGTTAAAACAGCAATAACGAGTAGCCCAGAATTCGAGCATCACATGGAAATGGTGGGTGAGCTTCGGCATCCGAATTTGGTGCCCGTTAGAGCTTATTTCCAGGCAAAGGGAGAGAGGCTGGTGATCTATGATTATCAACCTAATGGCAGCCTCTTTAACCTCATACATGGTTCGAAATCAACGAGAGCGAAGCCTCTTCACTGGACTTCATGCTTAAAGATAGCTGAAGATGTCGCCCATGGAGTCGCCTTTATGCATCAAGCCTCGAGATTAATCCATGGCAACCTGAAGTCGACTAATGTCCTTCTTGGCGTGGACTTTGAAGCTTGTGTCACAGACTATGGCTTGGCCCTCCTTGCAGATTTTTCATCAACTGAAGACCCTGACTCTGCAGCTTATAAAGCACCGGAGACTCGCAACTCTAGCCGCCGATCGACTCCCAAGTCCGACGTATATGCCTTCGGGGTGCTTCTATTAGAGCTTCTTACGGGTAAACATCCTTCTCAACATCCTTTCCTTGCACCCGCGGATATGCAACATTGGGTTAGAGCAATGAGGGATGACGATGGTGCTGATGAACATAATGGGCTTGGAATGCTTACAGAAGTCGCTAGTATTTGCGGTGCAAGGTCGCCTGAGCAGAGGCCGGCAATGTGGCAAGTCTTGAAGATGATACAGGAGATAAAGGACAGTGTAACGATGGAGGATACAACTGGTAGTGTTTCATAA	1980	0.4995	MPPPRTPLLVLFFFSFSLLLSSSSGAASSTIDLLLPSDAVSLLSFKSKADPGNKLLYALNERYDYCQWQGVKCAHGRVVRFVLQSFGLRGVFPPDTLSRLDQLRVLSLRNNSLFGPIPDLSSLLNLKSLFLDHNSFSGSFPPSILFLHRLLTLSLSHNNLTGSIPTGLTLLDRLISLRLDSNWFNGTIPPLNQSSLQIFNVSGNNLTGPVPMTPTLSRFSPASFSGNQGLCGEIIHLACNSRSPFFSPSNASSASPLGQSAESQGIVVVPSHSSTKEKHKNTALILGFTIGFSVLIASILLAIALFRKRGSSRRPESPKIQESLETKEVNAPPPSSLAVETEIEQNREWSEKAKKIEKIREAHKSGNLVFCSGEPQLCTIEQLMRASAELLGRGNIGTTYKAVLDGHLIMTVKRLDAVKTAITSSPEFEHHMEMVGELRHPNLVPVRAYFQAKGERLVIYDYQPNGSLFNLIHGSKSTRAKPLHWTSCLKIAEDVAHGVAFMHQASRLIHGNLKSTNVLLGVDFEACVTDYGLALLADFSSTEDPDSAAYKAPETRNSSRRSTPKSDVYAFGVLLLELLTGKHPSQHPFLAPADMQHWVRAMRDDDGADEHNGLGMLTEVASICGARSPEQRPAMWQVLKMIQEIKDSVTMEDTTGSVS	659

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju09g2096	659	Gene3D	Ribonuclease Inhibitor	36	191	IPR032675	-
	Alju09g2096	659	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	14	648	IPR046959	-
	Alju09g2096	659	MobiDBLite	consensus disorder prediction	312	336	-	-
	Alju09g2096	659	MobiDBLite	consensus disorder prediction	543	564	-	-
	Alju09g2096	659	ProSiteProfiles	Leucine-rich repeat profile.	102	124	IPR001611	GO:0005515
	Alju09g2096	659	FunFam	Leucine-rich repeat receptor-like protein kinase	149	241	-	-
	Alju09g2096	659	Gene3D	Phosphorylase Kinase; domain 1	350	462	-	-
	Alju09g2096	659	SUPERFAMILY	Protein kinase-like (PK-like)	389	646	IPR011009	-
	Alju09g2096	659	FunFam	Probable inactive receptor kinase At5g67200	37	147	-	-
	Alju09g2096	659	Gene3D	Ribonuclease Inhibitor	192	242	IPR032675	-
	Alju09g2096	659	Pfam	Protein kinase domain	388	587	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Alju09g2096	659	ProSiteProfiles	Leucine-rich repeat profile.	149	171	IPR001611	GO:0005515
	Alju09g2096	659	Gene3D	Transferase(Phosphotransferase) domain 1	464	657	-	-
	Alju09g2096	659	SUPERFAMILY	L domain-like	40	232	-	-
	Alju09g2096	659	ProSiteProfiles	Protein kinase domain profile.	385	645	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju09g2096	Alju-ChrAlju09	44536390	44539291	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju09g2096	20	653	Receptor kinase-like Gene Family	AT3G50230	54.587	0.0	651

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Alju09g2096		Pkinase	9.9e-29	CL0016