Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2093 ATGGAGGGTAAGGTTTCTCTCTTTATCATTACCCTTTCATTTTTTCTCTTTGCTTCTTTCATCTTCTCTGTTCCTCTCCGCCTCTTTCATGGTTGTGTGAGTATGGCCGTAGAGCTCATGATGGGTTACAGGAACGATAGCTTCGCGGCCAAAATGGATGATAATGTTGTTCAGGAAGCTGCCTCCGGCCTCGAGAGCGTCGAGAAGCTCATCAGGTTACTTTCTCAGACTCAGCAACAATTCCACTCTTCTTCTTCTTCTTCTTCCGCTTCTAAGTCTTCCCTCGATATCGAGATGGACTGTAAAGCCGTCGCCGACGTCGCCGTTTCCAAGTTCAAGAAGGTTATTTCTCTTCTGGGTCGAACCAGAACCGGTCATGCTCGATTTAGAAGAGCCCCTCTGCCGCAACCTCCACCTCCTCCTCCTCCTCCTGCCGTTAATCAAAACCCCGAGCCACAACCTTCTGAGCCCAAAGTTTATTATGCGACGCCGTTGCAGCAGATCCCGCCGGCCCTTCTTCAACACCAATCTCTTGGCGAACAACATCCCCTGATCCACAAAAATGGGGTGATTGAGAGGAAGGACTCGTTTAAAACCATTAATTTCTCGTATTCCTCTGCCGCGACTTCGTTTATGTCGTCTCTTACTGGCGATACTGATAGTAAACACCCGTCCTCGTCGTTGCCGGCGACCGCTTTTCAGATCACGAATCTGTCTCAGGTCTCCTCAGCGGGAAAGCCTCCTCTTTCCTCTTCTTCGCTGAAGAGAAAGTGTAGCTCCGAGAACTTGGGTTCCGGCAAGTGCGGCAGTTCCTCTAGTCGTTGCCATTGTTCTAAAAAGAGAAAAATGCGGTTGAAGAGAGTAGTGAGGGTGCCCGCAATAAGCTTGAAGATGGCTGATATTCCACCTGATGATTATTCATGGAGGAAGTACGGACAAAAACCCATTAAAGGATCCCCTCATCCTAGGGGATACTACAAGTGCAGTAGTGTTAGAGGGTGTCCAGCACGCAAACACGTAGAGCGAGCTCTGGACGATCCATCCATGTTAGTAGTCACCTACGAAGGCGATCATAATCACTCACTCTCTGCCACCGATTCAACGAATCTCATATTGGAATCTTCTTAG 1128 0.4876 MEGKVSLFIITLSFFLFASFIFSVPLRLFHGCVSMAVELMMGYRNDSFAAKMDDNVVQEAASGLESVEKLIRLLSQTQQQFHSSSSSSSASKSSLDIEMDCKAVADVAVSKFKKVISLLGRTRTGHARFRRAPLPQPPPPPPPPAVNQNPEPQPSEPKVYYATPLQQIPPALLQHQSLGEQHPLIHKNGVIERKDSFKTINFSYSSAATSFMSSLTGDTDSKHPSSSLPATAFQITNLSQVSSAGKPPLSSSSLKRKCSSENLGSGKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGDHNHSLSATDSTNLILESS 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2093 375 ProSiteProfiles WRKY domain profile. 297 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju09g2093 375 MobiDBLite consensus disorder prediction 132 151 - -
Alju09g2093 375 MobiDBLite consensus disorder prediction 239 273 - -
Alju09g2093 375 Pfam WRKY DNA -binding domain 304 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju09g2093 375 MobiDBLite consensus disorder prediction 126 158 - -
Alju09g2093 375 Gene3D WRKY domain 291 363 IPR036576 GO:0003700|GO:0006355|GO:0043565
Alju09g2093 375 FunFam WRKY transcription factor 65 286 363 - -
Alju09g2093 375 Pfam Plant zinc cluster domain 255 300 IPR018872 -
Alju09g2093 375 SMART WRKY_cls 302 362 IPR003657 GO:0003700|GO:0006355|GO:0043565
Alju09g2093 375 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 56 367 IPR044810 GO:0003700
Alju09g2093 375 MobiDBLite consensus disorder prediction 239 275 - -
Alju09g2093 375 SUPERFAMILY WRKY DNA-binding domain 299 362 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2093 Alju-ChrAlju09 44516030 44517894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2093 51 363 WRKY Transcription Factor Family AT2G24570 45.399 3.60e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Alju09g2093 WRKY 8.6e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2093 09 44516030 44517894 Alju09g2093 09 44516030 44517894 ECH