Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2087 ATGGCTCTCAGGGAAGATTCCCAGGATTTTCAGGACTCTTCGTTATTCCTCGATGCTCTCCTCTGTGAGGAAGATGGCTTCGACCAAGAAGAATCTCCTGAGAGGGATGTTCATGATGACGGCTCAGATTCGGCCGTTAGAGATCCTTCTTCTTTACCCTTCATTTTGTTGGAAAATGACTTGTTCTGGGAAGAAGCTGAGTTTGTCTCCCTTATCTCTAAGGAGGGAGAAACTCATTTAAATTCAAATAATCTAATTTCCGACGAGACTCTGCAGAAAGCTCGCGAGGAGGCTGTGAGATGGATTTCAAAAGTTTGTGGGCACTATGGTTTCTCTGCTTTGACCACAGTTCTGTCCGTGAACTACTTGGATAGGTTCGTGACCAGCCTCACGTTTCAGAAGGATAAGCCATGGATGACTCAGCTTGCTGCTGTTGCCTGTTTAGCTCTGGCTGCCAAAGTGGAAGAGATCCAAGTCCCTCTTCTTTTGGACCTCCAAGTGGAGCAATCGAAGTACGTGTTTGAAGCAAAGACAATACAGAGAATGGAGCTCTTAGTGTTATCAACTCTTAACTGGAGGATGAACCCTGTGACTCCAATCTCCTTCTTTGAACTTATTGTCAGAATGCTGGGTCTAAAGAGCCTCTTGCATTGGGAATTCCTGTTTTGGTGCGAGCGTGTGCTTCTACGTCTCATTCTGGATTCAAGGCTTATGAGTTATCGTCCATCTACATTAGCTGTTGCTATAATGATCCATGTTATTAGTGAGGTTGAACCGTTAAATGCAATGGAGCACAGAAATCAGCTAATGGTTTTGCTCAAAATCAGTGAGGAACAAGTGAATGAATGTTACAAGCTTATTCTGAAACTATTGTGCTGTCATGAAGACATTCAAAATATTAAGCAGAAACGCAAGCGGCTTTCCAGCCCAGATGGTGTCATTGATGTGTCTTTCGGCAGTGATTATTCAAATGACTTGTGGGCTAAAGCATCATCACTCTCATTGTCACTAGAGCCAATGTTTAAGCGAAGCAGAGCCCTAGAGCAGCAGATGCAACTGCCTTCCATGAATCGTGTGTCTATTGATGTTCTCCACAGCCCTCGTTAG 1107 0.4417 MALREDSQDFQDSSLFLDALLCEEDGFDQEESPERDVHDDGSDSAVRDPSSLPFILLENDLFWEEAEFVSLISKEGETHLNSNNLISDETLQKAREEAVRWISKVCGHYGFSALTTVLSVNYLDRFVTSLTFQKDKPWMTQLAAVACLALAAKVEEIQVPLLLDLQVEQSKYVFEAKTIQRMELLVLSTLNWRMNPVTPISFFELIVRMLGLKSLLHWEFLFWCERVLLRLILDSRLMSYRPSTLAVAIMIHVISEVEPLNAMEHRNQLMVLLKISEEQVNECYKLILKLLCCHEDIQNIKQKRKRLSSPDGVIDVSFGSDYSNDLWAKASSLSLSLEPMFKRSRALEQQMQLPSMNRVSIDVLHSPR 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2087 368 FunFam CYCLIN D32 196 285 - -
Alju09g2087 368 MobiDBLite consensus disorder prediction 27 47 - -
Alju09g2087 368 SUPERFAMILY Cyclin-like 179 315 IPR036915 -
Alju09g2087 368 CDD CYCLIN_AtCycD-like_rpt1 94 192 - -
Alju09g2087 368 Pfam Cyclin, N-terminal domain 72 195 IPR006671 -
Alju09g2087 368 Gene3D - 81 195 - -
Alju09g2087 368 Pfam Cyclin, C-terminal domain 197 303 IPR004367 -
Alju09g2087 368 SMART Cyclin_C_2 197 322 IPR004367 -
Alju09g2087 368 SUPERFAMILY Cyclin-like 64 195 IPR036915 -
Alju09g2087 368 SMART cyclin_7 100 188 IPR013763 -
Alju09g2087 368 MobiDBLite consensus disorder prediction 31 45 - -
Alju09g2087 368 Gene3D - 73 285 - -
Alju09g2087 368 CDD CYCLIN_AtCycD-like_rpt2 197 287 - -
Alju09g2087 368 FunFam D3-type cyclin 88 195 - -
Alju09g2087 368 PANTHER CYCLINS 62 298 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2087 Alju-ChrAlju09 44474796 44476227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2087 1 358 Core Cell Cycle Gene Families AT5G67260 47.826 2.13e-100 301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0228 12 2761987 2763345 Alju09g2087 09 44474796 44476227 CCT
Alju09g2087 09 44474796 44476227 Alju12g0228 12 2761987 2763345 ECH
Alju07g1933 07 45628155 45629545 Alju09g2087 09 44474796 44476227 ECH
Alju09g2087 09 44474796 44476227 Alju09g2087 09 44474796 44476227 ECH