Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2061 ATGCCTCCCCAAGATCCCGAGCACGAACAACCACTGTTAGTGGACTCTGACAAACAAACAACCGAAGCTGCTTACGATTCCTCCGAGAAAGTCGTGGTCGTCGGAATCGACGAGTCCAACAATGACTACGACGACTGTGATCGTGCCCCGCCGTTTTCATGGAAGAAGCTATGGCTCTTTACGGGCCCGGGTTTTCTTATGAGCATTGCCTTCCTCGATCCTGGAAATCTTGAGGGAGATCTTCAGGCTGGTGCAATTGCTGGCTACTCCCTCTTATGGCTTCTCATGTGGGCCACAGCCATGGGGCTTGTGGTTCAGCTTTTGGCGGCACGGCTCGGAGTTGTGACTGGGAAGCATCTGGCTGAGCTTTGCAGGGAGGAGTATCCAACTTGGGCGAGGATGGTACTGTGGGTTATGGCGGAGTTGGCTCTGATTGGGTCCGACATTCAAGAGGTTATTGGGAGCGCTATTGCTATCAGAATTCTAAGTAACGGTATTGTGCCCCTTTGGGCCGGTGTCGTCATCACAGCTTGTGATTGTTTTATTTTCCTGTTTCTTGAGAACTACGGTGTGAGGAAATTGGAAGCATTTTTTGCTGTTCTCATTGGTGTAATGGCCATCTCATTTGCGTGGATGTTTGGCGAAACAAAGCCCAGCGGAAAAGATCTTCTTCTTGGTATTTTGGTTCCGAAACTTAGCTCCAGAACAATACAGAAGGCTGTTGGAGTTGTGGGTTGCATTATCATGCCTCACAACGTATTCTTGCACTCTGCACTTGTTCAGTCAAGACAGGTTCAGCAGAACAAGAAAGGCCGAGTTCAGGAAGCACTTAATTATTATTCTATAGAATCAACCGCTGCCCTTATTGTCTCCTTTATCATTAATGTATTTGTCACGACAGTGTTTGCGAAGAGTTTTTATGGTACTGACCTTGCACATAGTGTTGGTCTTGTGAATGCTGGGCAGTATCTTGAAGAGAAGTATGGAGGTGGACTTCTGCCAATCTTATATATATGGGCTATTGGGTTATTAGCAGCTGGTCAAAGTAGCACTATTACAGGGACTTATGCTGGACAGTTTATAATGGGGGGTTTTCTTAATTTAAGGTTGAAAAAATGGATGAGGTCATTAATTACACGGAGTTGTGCTATCATCCCAACTGTGACCGTTGCTCTTGTCTTTGAAACATCAGAGGACTCGTTAGATGTTCTAAATGAATGGCTTAATGTTCTCCAGTCAATTCAAATCCCCTTTGCAGTCATTCCCTTGCTTTTTTTGGTGTCCAAGGAGCACATAATGGGCGCTTTCAGAATTGGCCCTGTCCTCAAGATAATTGCATGGTTTGTGGCTGCTCTGGTGATGGCGATCAACGGGTATCTTATGCTAGAATTCTTCAATTCTGAGGTCAATGGAGTTATGCTTGGTGCTTTTGTGTGTGCTTTTGCGGCTGCATATGTTGCATTCATACTTTACCTTGTTTCAAGGGCCATCACCTTTTCACCTGGGCAAAGTTCAACCCAATCAAAGATGATTACTAACTCAAATAATTAA 1551 0.4526 MPPQDPEHEQPLLVDSDKQTTEAAYDSSEKVVVVGIDESNNDYDDCDRAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLVVQLLAARLGVVTGKHLAELCREEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIRILSNGIVPLWAGVVITACDCFIFLFLENYGVRKLEAFFAVLIGVMAISFAWMFGETKPSGKDLLLGILVPKLSSRTIQKAVGVVGCIIMPHNVFLHSALVQSRQVQQNKKGRVQEALNYYSIESTAALIVSFIINVFVTTVFAKSFYGTDLAHSVGLVNAGQYLEEKYGGGLLPILYIWAIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRSLITRSCAIIPTVTVALVFETSEDSLDVLNEWLNVLQSIQIPFAVIPLLFLVSKEHIMGAFRIGPVLKIIAWFVAALVMAINGYLMLEFFNSEVNGVMLGAFVCAFAAAYVAFILYLVSRAITFSPGQSSTQSKMITNSNN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2061 516 MobiDBLite consensus disorder prediction 1 26 - -
Alju09g2061 516 Hamap Divalent metal cation transporter MntH [mntH]. 40 465 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju09g2061 516 PRINTS Natural resistance-associated macrophage protein signature 166 185 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju09g2061 516 PRINTS Natural resistance-associated macrophage protein signature 191 212 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju09g2061 516 PRINTS Natural resistance-associated macrophage protein signature 240 263 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju09g2061 516 PRINTS Natural resistance-associated macrophage protein signature 409 428 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju09g2061 516 PRINTS Natural resistance-associated macrophage protein signature 136 162 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju09g2061 516 PRINTS Natural resistance-associated macrophage protein signature 347 366 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju09g2061 516 PRINTS Natural resistance-associated macrophage protein signature 375 392 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju09g2061 516 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 55 433 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju09g2061 516 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 49 499 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju09g2061 516 Pfam Natural resistance-associated macrophage protein 78 439 IPR001046 GO:0016020|GO:0030001|GO:0046873
Alju09g2061 516 NCBIfam Nramp family divalent metal transporter 62 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2061 Alju-ChrAlju09 44263536 44266540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2061 7 501 Inorganic Solute Cotransporters AT2G23150 76.815 0.0 786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2061 09 44263536 44266540 Alju12g0242 12 3083188 3086165 CCT
Alju09g2061 09 44263536 44266540 Alju09g2061 09 44263536 44266540 ECH