Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2042 ATGAAAGCTAAAGTAAGAAATCTGGCTTCTCTTGTCGGATATGATCGATCCTGCGGGATGTATCACTGGCGCCCAATTTCTCAAATATCATTTATATCACACTGCAATGACTCAATGCGCTACCGCATGTTCCCGTGTCCAATTTGTAGAGCTCACGGTTTCAGTAGTAAGTCGGAGTCTGCTGGGACCGATTTCCCGGTGGAAAATGCGTACGAGCTGTTAGGAGTGTCACAGACCAGTTCATTTGCTGAGATTAAAGCGTCTTTTCGCAGATTGGCCAAGGAAACTCACCCAGACCTTGCTGACTCAAGTAGCGATTCATCTGCTTCGCTCCGATTTGTGGAAATCCTGGCCGCCTACGAGATTCTTTCAGATTCCGAGAAGAGAGCTCATTATGACAGATACCTGTTGTCTCAAACGAAGCTTGTGGAGAAGCATACTAGGCAGGGTTCAAAATTACACTTCTATAGATCACATGAAACAACTTCCAAGGATATGGAAGTTGTTGAATGGTTAAAGTGGTACAGATTAGCTATAAATGATATTTTGTCAGAGAAGAGGGTAGTAGTTGGAACAGGCTATTTTGATGTACTTGAGAGAGATTTTTACTCAGCCATACATGCGGCTTACTTTGGCCCTGAAATTGAGTCAATGAAGCTTCTCCCTGAGTGCTTTGAGGCTGAGGAAAGGTCCTCTTGTGAAACACCGGAGGTTTTGCACATAGTTTCAGGTCGTGATCTTTTTGGGATGGTTTGCCTAGCCAGTAAGAACCCAGAGATATCATCTACCAACAATGAAAAGTTAACTTCTTTCAGATCCTTCCATCCAGGCCTATGTCAATCTACAAAGAATGCAAAGATCCACACAAATGCAGAAGTTCCACATGAATTTGGAATTCCACGACTTCATGACTCTAAAATATCAAGTCATATATCAGATGCATATAGAGATCTAGAATTGCATATATCTGGAAGGGTGGTTGCTGTGGCCTCCAGGTTCCCTCCTGGAAGCTATTCTGATGCTGAAGTAGCAGAAGATCGCATTCATGTTTATCTTAATTCAGATGAATACACCAACCATACCAACAACTGTGATTCTAAAAATTACTTCACAAGTAGTTCAGCTGTCATAAAAACTCATATAGGAACCATAGCTGGGCTTGGGACCAGTTCAGACGAGAGTTCCTGTAATGTCTATGACAGTAGAGGGGCAAAGACCCATGTGATTATGAAACACAGGACCTTGCTGGTGAAGCACATGCACTGGTATCAAATTGGAGAAAAGGTTTCTATTTGTGAGTGTAGATGCACGAGAGCGAAATTACCACCAAGCAAATATTGGCTATTTGAGCCTCGTTGTGGTTTGCATGACATAGGGGGTTGGTATGTTGAAACATATGGCAAAGATAAGAAAGGTCTAACTATCCCATCTCAAAGGTTATGGGATGGCTGGGATGACGGTCAGCATTTTGAGAGAAGACTTCATCCAGCAATGTATCTACTTGCTCTTGCATATAGGACACTTGATCTTGAATATGCCAAAGTAAGAAAACAAACATTTAGGAGAGCTGTGGAAGGGCAACTGTTTAGAATCCTTCGTTGGTGCAAAAGACTTGGTTAA 1620 0.4235 MKAKVRNLASLVGYDRSCGMYHWRPISQISFISHCNDSMRYRMFPCPICRAHGFSSKSESAGTDFPVENAYELLGVSQTSSFAEIKASFRRLAKETHPDLADSSSDSSASLRFVEILAAYEILSDSEKRAHYDRYLLSQTKLVEKHTRQGSKLHFYRSHETTSKDMEVVEWLKWYRLAINDILSEKRVVVGTGYFDVLERDFYSAIHAAYFGPEIESMKLLPECFEAEERSSCETPEVLHIVSGRDLFGMVCLASKNPEISSTNNEKLTSFRSFHPGLCQSTKNAKIHTNAEVPHEFGIPRLHDSKISSHISDAYRDLELHISGRVVAVASRFPPGSYSDAEVAEDRIHVYLNSDEYTNHTNNCDSKNYFTSSSAVIKTHIGTIAGLGTSSDESSCNVYDSRGAKTHVIMKHRTLLVKHMHWYQIGEKVSICECRCTRAKLPPSKYWLFEPRCGLHDIGGWYVETYGKDKKGLTIPSQRLWDGWDDGQHFERRLHPAMYLLALAYRTLDLEYAKVRKQTFRRAVEGQLFRILRWCKRLG 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2042 539 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 41 538 - -
Alju09g2042 539 ProSiteProfiles dnaJ domain profile. 69 136 IPR001623 -
Alju09g2042 539 PRINTS DnaJ domain signature 108 128 IPR001623 -
Alju09g2042 539 PRINTS DnaJ domain signature 89 104 IPR001623 -
Alju09g2042 539 PRINTS DnaJ domain signature 71 89 IPR001623 -
Alju09g2042 539 Pfam DnaJ domain 69 133 IPR001623 -
Alju09g2042 539 ProSitePatterns Nt-dnaJ domain signature. 113 132 IPR018253 -
Alju09g2042 539 CDD DnaJ 69 125 IPR001623 -
Alju09g2042 539 Gene3D DnaJ domain 60 157 IPR036869 -
Alju09g2042 539 SUPERFAMILY Chaperone J-domain 68 139 IPR036869 -
Alju09g2042 539 SMART dnaj_3 68 128 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2042 Alju-ChrAlju09 44134462 44139080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2042 71 133 C2H2 Transcription Factor Family AT1G74250 48.485 3.16e-10 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2042 09 44134462 44139080 Alju09g2042 09 44134462 44139080 ECH