Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2030 ATGACGCCGTTCACACCTTCACTCCCTTCTTTGCACCAAATCACCACCACCACTCCTTTCTCCGGCATGAACAAGAATAATCAGATTCATAGGACTCGACCCTGGCCCGGATTCCCTTCCTCCACCGCCTTCAATTCCTTCGGCGACGCTAATTGCATGGAACAATTACTTGTTCACTGTGCCAACGCCATCGAATCCAACGACGTCACTCTTGCCCAGCAAATCCTCTGGGTTCTGAACAACATAGCCTCTCCCGACGGCGACTCCAATCAACGCCTCGCCTCCGCCTTCAACCGCGCCCTCGCCGCCCGTGCCGCCAAATCCGGAAGCTGCAAAATGCTCGCCGTCGTGGCCGACGTCGCTCACAACACCAACCTCGCCGCCATAGACATCCACAGCTTCTCCGTTATCGAGCTTGCCAACTTCGTCGACCTAACCCCTTGGCACCGATTCGGCTTCACCGCCGCCAACTCGGCCATTCTAGAAGTTACCGAGGGATTTTCAGTTATTCACATCGTCGACTTAAGCTCCACGCATTGCATGCAGATTCCCACGCTCATCGACGCCATCGCCACCCGCCACGAGGTCCCTCCGTTAATTAAGCTCACCGTCTCAGCTTCAAATAACGACATTCCTCCTATACTTAACCTCTCCTACGACGAATTAGGCGCGAAGCTGGTAAGCTTCGCGAGGTCTAAGAACATAATATTGGAATTCAAAGTGATTTCATCGAGTTATAAAGATGGGTTCGCTTCTCTGATCGAACACCTTCGGGTGCAACAGATGGTTTTGGCGGCAGAAGGTAACAGAAGGGAAGCTCTGGTGATAAACTGTCACATGATGCTTCATTATATCCCAGAAGAAACCCTAGAATCCGACCATTCAATCTCGAACTCTTACATTTACGAATCTTCGTCGTTGCGATCGATGTTTCTGAGGGCGGTGCGGAGCTTAGAGCCGACCATTGTAGTTTTAGCGGACGAAGACGCAGATTTGACATCGAACAATCCGGTGACTAGGCTGAGGTCAGCGTTTAACTACCTGTGGATACCGTACGACACGGTGGACACGTTTTTGCCGAAAGGGAGCCGACAACGGCAATGGTACGAGGCGGATATAAGCTGGAAGATAGAGAATGTTATAGCACAGGAAGGGTTACAGAGAGTGGAGAGGGTGGAGCCGAAGAGCAGGTGGGAGCAGAGGATGAGGAATGTCAAGTTTCAAGGGGTTGGGTTGAGTGAGGAGGGAGTTTCAGAGGTAAAGGCGATGCTTGATGAGCATGCTGCTGGGTGGGGATTGAAGAAGGAAGATGAACATCTTGTTCTTACCTGGAAAGGACACAATGTCGTTTTTGCCTCTATTTGGATACCTGCTTGA 1377 0.5127 MTPFTPSLPSLHQITTTTPFSGMNKNNQIHRTRPWPGFPSSTAFNSFGDANCMEQLLVHCANAIESNDVTLAQQILWVLNNIASPDGDSNQRLASAFNRALAARAAKSGSCKMLAVVADVAHNTNLAAIDIHSFSVIELANFVDLTPWHRFGFTAANSAILEVTEGFSVIHIVDLSSTHCMQIPTLIDAIATRHEVPPLIKLTVSASNNDIPPILNLSYDELGAKLVSFARSKNIILEFKVISSSYKDGFASLIEHLRVQQMVLAAEGNRREALVINCHMMLHYIPEETLESDHSISNSYIYESSSLRSMFLRAVRSLEPTIVVLADEDADLTSNNPVTRLRSAFNYLWIPYDTVDTFLPKGSRQRQWYEADISWKIENVIAQEGLQRVERVEPKSRWEQRMRNVKFQGVGLSEEGVSEVKAMLDEHAAGWGLKKEDEHLVLTWKGHNVVFASIWIPA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2030 458 ProSiteProfiles GRAS family profile. 44 456 IPR005202 -
Alju09g2030 458 Pfam GRAS domain family 53 455 IPR005202 -
Alju09g2030 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 52 444 IPR005202 -
Alju09g2030 458 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2030 Alju-ChrAlju09 44049791 44051167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2030 23 457 GRAS Transcription Factor Family AT3G49950 57.763 2.52e-176 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju09g2030 GRAS 3.5e-91 CL0063