Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2028 ATGAGTTGCAACGGCTGCCGAGTCCTTCGAAAGGGCTGCAGCGAGTCTTGTATTCTGCGGCCTTGCTTGCAGTGGATCGATACGCCCGAAGCCCAAGGACATGCCACTGTCTTCGTCGCCAAGTTCTTTGGCCGCGCTGGTCTCATGTCCTTCATTTCCAACGTTCCTGAAAATCAAAGGCCTGCTCTGTTTCAGTCCTTGTTGTTCGAAGCATGTGGGCGAACGGTGAACCCGGTGAACGGAGCTGTGGGGCTTCTGTGGACGGGAAACTGGCACTTGTGTCAGGCTGCCGTTGAGACAGTGCTGCGTGGCGGTACGTTAAGGCCCATTCCCGAGCTTGTCGGCTTGGATGCTTCTACTCTGGCTGCCGACGAGGCGTCTGAGGCGGAAGTCGCCTGCACTGACATGTGGAGCGTCAGGGATCCGAACCTGAGTTGCCGGTTCACGAATTCGCGATCTAACAAGTTCTCTTCCTGCAAACGCAAGCGATCGGATGAATCCAACCAGCCTCAGAAGGCTGATCTTGATCTCCGGTTGATGCCGAGTTTCCTGCGGAAAGTGTCAGGCTACAGCTGCAGGCCGGAAATCGGCCAGCCGGGTACGCCATCGATGAACTCAGAAGATTCCGTGACGACGACGGTGTGCCTGGAAAGTGGACCTGGAGTTCACTACGCTCATGCCGGAGAGCCCAAACTTCTCAACTTTTTCGCTTGA 714 0.5616 MSCNGCRVLRKGCSESCILRPCLQWIDTPEAQGHATVFVAKFFGRAGLMSFISNVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHLCQAAVETVLRGGTLRPIPELVGLDASTLAADEASEAEVACTDMWSVRDPNLSCRFTNSRSNKFSSCKRKRSDESNQPQKADLDLRLMPSFLRKVSGYSCRPEIGQPGTPSMNSEDSVTTTVCLESGPGVHYAHAGEPKLLNFFA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2028 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 210 - -
Alju09g2028 237 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Alju09g2028 237 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2028 Alju-ChrAlju09 44033128 44033934 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2028 1 237 AS2 family AT3G49940 57.255 1.15e-85 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju09g2028 LOB 4.8e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju12g0273 12 3433556 3434395 Alju09g2028 09 44033128 44033934 CCT
Alju09g2028 09 44033128 44033934 Alju12g0273 12 3433556 3434395 ECH
Alju09g2028 09 44033128 44033934 Alju09g2028 09 44033128 44033934 ECH