Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2023 ATGTCTCGCCGCCCGGACTATACGGACTACGAGTCCGTCGACATCCACTGGGGCAATGGTGACGACTACGACTACGACTACGGCGTCGAAACAATGCTCATCAGTAGGAGAAACTACCACCTCTATGAAGGGCTCCGGTTCTCAGATAAAATCAAAGTCCTCATAAAGATTTACAAACCTGAGGTTGAAGAGAAGCAGATCAAGAAGGAGATTAAAATCCTGCAAATCCTGTCTGGAGGGCCTAACGTTGCTCGTCTTCTTGATGTCGTTAGAGACCACCACTCAGGTGCTCCAAATCTGATTTTCGAATATGTAAATAATACTGAATTTCGGGCACTGTGCCCCACACTCTCTGCTGACGCTATTATAGATTACAGCTTCCAACTCTTAAGGGCCGTGGAATATGCCCACTCCCAAGGAATCATGAACAGGGATGTGAACCCTGAAACTGTGTTCATTGATCCATGTACTGGAAAGGTCTGCCTAATGGACTGGGGCCAGGCCGAATTTTATTGTCCGGCCCAAAAATACATTACCAGTGTTGGATCAAAATTTTACAGGGGTCCTGAGCTCGTTTATGCTATCGAAGAATATGATTATTCCGTTGACTTGTGGAGTGTCGGCTGCATCATAGCCGATATGGCATCTGGACTCGTGCCCTTCTTTGCAGGAAAGAACGATTCAAATGAAATGATCAAAACTGCAAGGGCCCATGAATTCTTCGGTCCACTCAAGAGCGGCCTGAGGCCCCTGGCTACACTGTTGACTGAACTCGTCACTCTGATTACTGGCATCTGTGATGTGATGTGTGATTTTTACTTTACTACTTTGATGGATGATGGATATGATCGGTTGTGA 858 0.4627 MSRRPDYTDYESVDIHWGNGDDYDYDYGVETMLISRRNYHLYEGLRFSDKIKVLIKIYKPEVEEKQIKKEIKILQILSGGPNVARLLDVVRDHHSGAPNLIFEYVNNTEFRALCPTLSADAIIDYSFQLLRAVEYAHSQGIMNRDVNPETVFIDPCTGKVCLMDWGQAEFYCPAQKYITSVGSKFYRGPELVYAIEEYDYSVDLWSVGCIIADMASGLVPFFAGKNDSNEMIKTARAHEFFGPLKSGLRPLATLLTELVTLITGICDVMCDFYFTTLMDDGYDRL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2023 285 FunFam Casein kinase II subunit alpha 9 104 - -
Alju09g2023 285 Gene3D Phosphorylase Kinase; domain 1 9 100 - -
Alju09g2023 285 Pfam Protein kinase domain 51 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2023 285 PANTHER CASEIN KINASE II SUBUNIT ALPHA 3 245 IPR045216 GO:0004674|GO:0006468
Alju09g2023 285 SUPERFAMILY Protein kinase-like (PK-like) 40 237 IPR011009 -
Alju09g2023 285 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2023 285 SMART serkin_6 39 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju09g2023 285 Gene3D Transferase(Phosphotransferase) domain 1 101 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2023 Alju-ChrAlju09 43995126 43997608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2023 69 232 Core Cell Cycle Gene Families AT1G76540 29.885 5.29e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Alju09g2023 Pkinase 8.2e-36 CL0016