Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2022 ATGGGACAACAGTCTGAAACGGTGGTGGTGCGGCAATTCGACCCCCATAAGGACCGACAGAGAGTGGAGGCCATGGAAAAGATATGTGAGGTCGGACCCAGTGGGAAGCTCTCCCTGTTCACCGACCTCATGGGTGACCCGATTTGCAGGGTCCGCCACTCACCTGCTTTTCTCATGCTGGTCGCTGAGAAGGGGCAAGAGATAGTGGGAATGATAAGGGGCTGCATCAAAACCGTTACATGCGGAAAGAAGCTATCCAGAAATGCGATAAACCCCTACTTGAATATCAACGACGCCGCCGAGACCTGCCAGGCCACTCCCAGATACGTCCCTGTATACACCAAAGTCGCCTACATTCTAGGCCTCCGAGTCTCGCCTTCTCACCGGAGGATGGGAATAGGGTTGAAGCTGGTGCAGAGAATGGAGGAATGGTTTAGAAATAATGGGGTTGAGTACTCGTATATAGCGACGGAAAATGACAATTTAGCATCGGTTACGCTCTTCACCGACAAATGCGGATACTCCAGGTTCCGTACCCCGTCCATCCTTGTCAATCCCGTTTACGCTCACAGAGAGAAGGTCTCTCGCAAGGTCACCATCATCCCACTCTGCTCCGACGACGCCGAATCCCTCTATCGTCGTCGCTTCGCCACCACCGAATTCTTCCCCCGCGACATTGATTCCATCCTCAAAAACAAACTCAGCCTGGGGACCTTCCTGGCCGTCCCAAGTGGGTCCTACCGCACAGAGACATGGCCCGGGTTGGATCGCTTCCTGTCGGACCCACCAGAGTCCTGGGCAGTGCTCAGCGTGTGGAACTGCAAGGACGTGTTCACGCTCGAGGTGCGGGGCGCGTCGCACGTGAAGCGCACCCTAGCGAGAACGACCCGAATAGTGGATCGGGCCTTGCCGTTTCTGAGACTGCCGTCGATCCCGAACTTCTTCAGACCGTTCGGATTCCACTTCCTGTACGGATTGGGAGGCGAGGGCCCAGAAGCGGTGAAGATGGTGAGGGCCCTGTGTGGGTTCGCACATAACCTGGCCAAGGAACGTGGCTGTGGAGTAGTGGCGACGGAGGTCTCGAGCCGCGATCCCCTCAAGTTGGGGATACCACACTGGAAGATGTTATCTTGCGATGAGGATTTGTGGTGCATCAAGCGGCTCGGGGAAGACTACAGTGACGGCTCTGTGGGTGACTGGACCAAATCTCCGCCCGGATGGTCCATTTTTGTTGATCCCAGAGAGGTTTAA 1251 0.558 MGQQSETVVVRQFDPHKDRQRVEAMEKICEVGPSGKLSLFTDLMGDPICRVRHSPAFLMLVAEKGQEIVGMIRGCIKTVTCGKKLSRNAINPYLNINDAAETCQATPRYVPVYTKVAYILGLRVSPSHRRMGIGLKLVQRMEEWFRNNGVEYSYIATENDNLASVTLFTDKCGYSRFRTPSILVNPVYAHREKVSRKVTIIPLCSDDAESLYRRRFATTEFFPRDIDSILKNKLSLGTFLAVPSGSYRTETWPGLDRFLSDPPESWAVLSVWNCKDVFTLEVRGASHVKRTLARTTRIVDRALPFLRLPSIPNFFRPFGFHFLYGLGGEGPEAVKMVRALCGFAHNLAKERGCGVVATEVSSRDPLKLGIPHWKMLSCDEDLWCIKRLGEDYSDGSVGDWTKSPPGWSIFVDPREV 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2022 416 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 54 179 IPR016181 -
Alju09g2022 416 Gene3D - 18 195 - -
Alju09g2022 416 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 1 416 - -
Alju09g2022 416 CDD NAT_SF 59 152 - -
Alju09g2022 416 FunFam Probable N-acetyltransferase HLS1-like 17 181 - -
Alju09g2022 416 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 194 IPR000182 GO:0016747
Alju09g2022 416 Pfam Acetyltransferase (GNAT) family 53 174 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2022 Alju-ChrAlju09 43961014 43962689 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Alju09g2022 Acetyltransf_1 3.1e-18 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2022 09 43961014 43962689 Alju12g0279 12 3518031 3519519 CCT
Alju09g2022 09 43961014 43962689 Alju09g2022 09 43961014 43962689 ECH