Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2006 ATGGGCTCCGTAAGCCAGAAGGAAGCCGCAGGTAGAGACCCTTCGTCGAGAGCCAAAATGAAGTATAACCCACGGGTCTCCAGCTCTCGTCGCAAGAATAGGAAGGCGCACTTCACGGCGCCGTCCAGCGTTCGCCGCATTCTGATGAGCGCGCCTCTGTCGACCGACCTTCGATCCAAATACAACGTGCGGTCCATGCCAGTTCGCAAGGATGACGAGGTTCAAGTTGTTCGCGGCACATACAAAGGTCGTGAGGGAAAGGTGGTTCAGGTCTACCGCCGCAAATGGGTCATTCACATCGAGCGGATTACTCGTGAGAAGGTAAATGGTTCAACCGTGAATGTTGGGATTCACCCTTCGAAAGTTGTCATCTCAAAGCTGAGGTTGGATAAGGACCGCAAGTCCTTGCTTGATCGCAAGGCCAAGGGACGTGCGGCCGCCGACAAGGTCAAGGGCACCAAGTTTACTGCTGAGGACATTATGCAAAATGTTGATTAG 498 0.5361 MGSVSQKEAAGRDPSSRAKMKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSTDLRSKYNVRSMPVRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGIHPSKVVISKLRLDKDRKSLLDRKAKGRAAADKVKGTKFTAEDIMQNVD 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2006 165 FunFam 60S ribosomal protein L26 20 163 - -
Alju09g2006 165 Pfam KOW motif 70 101 IPR005824 -
Alju09g2006 165 MobiDBLite consensus disorder prediction 24 39 - -
Alju09g2006 165 Gene3D - 20 163 IPR014722 -
Alju09g2006 165 SMART kow_9 67 94 IPR005824 -
Alju09g2006 165 MobiDBLite consensus disorder prediction 1 41 - -
Alju09g2006 165 ProSitePatterns Ribosomal protein L24 signature. 71 88 IPR005825 GO:0003735|GO:0005840|GO:0006412
Alju09g2006 165 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 27 140 IPR005756 GO:0003735|GO:0006412|GO:0015934
Alju09g2006 165 NCBIfam 50S ribosomal protein L24 27 141 IPR005756 GO:0003735|GO:0006412|GO:0015934
Alju09g2006 165 CDD KOW_RPL26 71 124 IPR041988 GO:0003723
Alju09g2006 165 Hamap 50S ribosomal protein L24 [rplX]. 15 140 IPR005756 GO:0003735|GO:0006412|GO:0015934
Alju09g2006 165 SUPERFAMILY Translation proteins SH3-like domain 27 144 IPR008991 -
Alju09g2006 165 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 20 161 IPR005756 GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2006 Alju-ChrAlju09 43847795 43848497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2006 20 165 Cytoplasmic Ribosomal Protein Gene Family AT3G49910 89.041 7.70e-96 272
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2006 09 43847795 43848497 Alju09g2006 09 43847795 43848497 ECH